Included Properties
Data Type
Lab
Experiment Type
Dataset
Sample
Publication
Treatments
Assay Details
Center
Set Type
Status
Commendations
Warnings
9 Common Properties
Project
4DN
Experiment Category
Sequencing
Organism
Human
Sample Type
immortalized cells
Sample Tier
Tier 2
Sample Category
Tier 2
Organ/System
No value
Tissue Source
blood cell
Modifications
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
TSA-seq
K562 (Tier 2)
TSA-seq v2 Lamin B1 in k562
condition2 - conditionAI - anti-Lamin B1
Target
LMNB1 protein
TSA-seq
K562 (Tier 2)
TSA-seq v2 Lamin B1 in k562
input - condition2 - conditionAI - anti-Lamin B1
Target
LMNB1 protein
CUT&RUN
K562 (Tier 2)
H3K4me3 - K562
Active Motif 39159
Target
H3K4me3
TSA-seq
K562 (Tier 2)
TSA-seq CENPB in k562 cells
condition2 - conditionE - anti-CENPB
Target
CENPB protein
TSA-seq
K562 (Tier 2)
TSA-seq CENPB in k562 cells
input - condition2 - conditionE - anti-CENPB
Target
CENPB protein
TSA-seq
K562 (Tier 2)
TSA-seq POL1RE in k562 cells
condition2 - conditionE - anti-POL1RE
Target
POLR1E protein
TSA-seq
K562 (Tier 2)
TSA-seq POL1RE in k562 cells
input - condition2 - conditionE - anti-POL1RE
Target
POLR1E protein
TSA-seq
K562 (Tier 2)
TSA-seq MKI67IP in k562 cells
condition2 - conditionE - anti-MKI67IP
Target
NIFK protein
TSA-seq
K562 (Tier 2)
TSA-seq MKI67IP in k562 cells
input - condition2 - conditionE - anti-MKI67IP
Target
NIFK protein
DamID-seq
K562 (Tier 2)
DamID-seq on K562 cells (2020-07-01)
Dam-only control
Target
None (Control)
DamID-seq
K562 (Tier 2)
DamID-seq on K562 cells (2020-07-01)
Nucleolar Targeting Signal (4X-AP3)-Dam
Target
Nucleolus Localization Sequence (4X-AP3D1) (engineered reagent)
TSA-seq
K562 (Tier 2)
TSA-seq SON in K562 - HS
Heat shock 30 min: input only - condition2
Target
SON protein