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23 fewer sets in 4DN-only Data.

Included Properties

Sample Type
Sample Category
Sample
Organ/System
Tissue Source
Treatments
Assay Details
Set Type
Warnings
11 Common Properties
 Project
ENCODE
 Lab
Job Dekker, UMMS
 Experiment Category
Sequencing
 Experiment Type
Hi-C
 Organism
Human
 Sample Tier
Unclassified
 Publication
No value
 Modifications
No value
 Center
3U54HG007010-05S1
 Status
Released
 Commendations
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
Dilution Hi-C
astrocyte of the cerebellum
Hi-C on ENCODE3 cell lines
astrocyte of the cerebellum
Enzyme
HindIII
Dilution Hi-C
astrocyte of the spinal cord
Hi-C on ENCODE3 cell lines
astrocyte of the spinal cord
Enzyme
HindIII
Dilution Hi-C
brain pericyte
Hi-C on ENCODE3 cell lines
brain pericyte
Enzyme
HindIII
Dilution Hi-C
DLD1
Hi-C on ENCODE3 cell lines
DLD1
Enzyme
HindIII
Dilution Hi-C
ACHN
Hi-C on ENCODE3 cell lines
ACHN
Enzyme
HindIII
Dilution Hi-C
endothelial cell of hepatic sinusoid
Hi-C on ENCODE3 cell lines
endothelial cell of hepatic sinusoid
Enzyme
HindIII
Dilution Hi-C
endometrial microvascular endothelial cells
Hi-C on ENCODE3 cell lines
endometrial microvascular endothelial cells
Enzyme
HindIII
Dilution Hi-C
brain microvascular endothelial cell
Hi-C on ENCODE3 cell lines
brain microvascular endothelial cell
Enzyme
HindIII
in situ Hi-C
HepG2
Hi-C on ENCODE3 cell lines
HepG2
Enzyme
DpnII
in situ Hi-C
HeLa-S3
Hi-C on ENCODE3 cell lines
HeLa-S3
Enzyme
DpnII
Dilution Hi-C
SK-N-DZ
Hi-C on ENCODE3 cell lines
SK-N-DZ
Enzyme
HindIII
Dilution Hi-C
A549
Hi-C on ENCODE3 cell lines
A549
Enzyme
HindIII
Dilution Hi-C
SK-N-DZ
Hi-C on ENCODE3 cell lines
SK-N-DZ
Enzyme
HindIII
Dilution Hi-C
T47D
Hi-C on ENCODE3 cell lines
T47D
Enzyme
HindIII
Dilution Hi-C
SK-N-MC
Hi-C on ENCODE3 cell lines
SK-N-MC
Enzyme
HindIII
Dilution Hi-C
Caki2
Hi-C on ENCODE3 cell lines
Caki2
Enzyme
HindIII
Dilution Hi-C
SJCRH30
Hi-C on ENCODE3 cell lines
SJCRH30
Enzyme
HindIII
Dilution Hi-C
LNCaP clone FGC
Hi-C on ENCODE3 cell lines
LNCaP clone FGC
Enzyme
HindIII
Dilution Hi-C
G401
Hi-C on ENCODE3 cell lines
G401
Enzyme
HindIII
Dilution Hi-C
Panc1
Hi-C on ENCODE3 cell lines
Panc1
Enzyme
HindIII
Dilution Hi-C
SK-MEL-5
Hi-C on ENCODE3 cell lines
SK-MEL-5
Enzyme
HindIII
Dilution Hi-C
NCI-H460
Hi-C on ENCODE3 cell lines
NCI-H460
Enzyme
HindIII
Dilution Hi-C
RPMI-7951
Hi-C on ENCODE3 cell lines
RPMI-7951
Enzyme
HindIII
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