ExperimentSetReplicate

ExperimentSet4DNESA1NH937
released
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Early fraction S-phase Repliseq on unmodified iPSCs- all cells were grown in a single culture and split into 2 batches prior to BrdU labeling and FACs sorting

   November 1st, 2021 at 6:12pm
Source Publication
Cohesin-mediated loop anchors confine the locations of human replication origins.
Emerson DJ, Zhao PA, et al., Nature 2022

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
induced pluripotent stem cells
Sample 
7889SA3.5
Experiment Type(s) 
2-stage Repli-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Fraction: early fraction of 2 fractions

8 Processed Files

Quality Metrics

Experiment
For File
Total Aligned
Removed Duplicates
Details
Experiment
4DNEX4WG3TU8
Bio Rep 1, Tec Rep 1
2-stage Repli-seq on 7889SA3.5 S-phase early fraction
File
Alignments (bam)
4DNFIXEJ67ID
13.34m
0.0%
File
Alignments (bam)
4DNFIZSHXV5X
12.97m
0.0%
File
Alignments (bam)
4DNFIO8UVRLO
13.41m
1.748%
File
Alignments (bam)
4DNFI5QYQTVQ
13.3m
1.727%