Included Properties
Data Type
Lab
Experiment Category
Experiment Type
Dataset
Sample Category
Sample
Publication
Assay Details
Center
Set Type
Commendations
Warnings
9 Common Properties
Project
4DN
Organism
Mouse
Sample Type
stem cells
Sample Tier
Tier 2
Organ/System
No value
Tissue Source
stem cell
Modifications
No value
Treatments
No value
Status
Released
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S16
Fraction
P17 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S15
Fraction
P16 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S14
Fraction
P15 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S13
Fraction
P14 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S12
Fraction
P13 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S11
Fraction
P12 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S10
Fraction
P11 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S9
Fraction
P10 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S8
Fraction
P9 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S7
Fraction
P8 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S6
Fraction
P7 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S5
Fraction
P6 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S4
Fraction
P5 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S3
Fraction
P4 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S2
Fraction
P3 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
S1
Fraction
P2 of 16 fractions
Multi-stage Repli-seq
F121-9-CASTx129 (Tier 2)
16-fraction Repli-seq on F121-9 mouse ESC
G1
Fraction
G1 of 16 fractions
PLAC-seq
F121-9-CASTx129 (Tier 2)
PLAC-seq time course of EpiLC differentiation
0 h, SMC1A
Target
Smc1a (mouse)
PLAC-seq
F121-9-CASTx129 (Tier 2)
PLAC-seq time course of EpiLC differentiation
0 h, H3K27ac
Target
H3K27ac (mouse)
RNA-seq
F121-9-CASTx129 (Tier 2)
RNA-seq time course of EpiLC differentiation
0 h
-
ChIP-seq
F121-9-CASTx129 (Tier 2)
ChIP-seq time course of EpiLC differentiation
confluent mESCs
Target
H3K27ac (mouse)
ChIP-seq
F121-9-CASTx129 (Tier 2)
ChIP-seq time course of EpiLC differentiation
0 h
Target
H3K27ac (mouse)
ATAC-seq
F121-9-CASTx129 (Tier 2)
ATAC-seq time course of EpiLC differentiation
0 h
-
DNA FISH
F121-9-CASTx129 (Tier 2)
DNA-FISH in F121-9 cells
non-NAD BAC probe pPK1003
Target
Nucleolus, Chromosomes, GRCm38:15:84216729-84409126 mouse region
DNA FISH
F121-9-CASTx129 (Tier 2)
DNA-FISH in F121-9 cells
non-NAD BAC probe pPK1000, IF Ab nuclephosmin
Target
Nucleolus, Chromosomes, GRCm38:7:130062900-130222254 mouse region