ExperimentSetReplicate

ExperimentSet4DNESX1HTE4K
released

H3K27ac ChIP-seq time course of EpiLC differentiation in F121-9 mESCs, 0hr time point

   January 22nd, 2021 at 12:35am

Data Usage Guidelines  


Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
stem cells
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: H3K27ac (mouse)

5 Processed Files

Quality Metrics

Experiment
For File
PCR Bottleneck Coefficient (PBC)
Nonredundant Read Fraction (NRF)
Filtered & Deduped Reads
Report
Details
Experiment
4DNEXMTUU2CL
Bio Rep 1, Tec Rep 1
ChIP-seq against H3K27ac (mouse) on F121-9-CASTx129 (Tier 2)
File
Read Positions (bed)
4DNFIW2WQGIY
0.95
0.95
32.07m
Experiment
4DNEXZDL97JA
Bio Rep 2, Tec Rep 1
ChIP-seq against H3K27ac (mouse) on F121-9-CASTx129 (Tier 2)
File
Read Positions (bed)
4DNFI7CGBLJ9
0.92
0.92
19.9m