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Data Type
  • ExperimentSetReplicate52
    • Lab
    Experiment Category
    Experiment Type
    Dataset
    Sample
  • RPE-hTERT (Tier 2)52
    • Organ/System
    Publication
    Modifications
    Treatments
    Assay Details
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    Set Type
  • Replicate52
    • Status
    Commendations
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    6 Common Properties
     Project
    4DN
     Organism
    Human
     Sample Type
    immortalized cells
     Sample Tier
    Tier 2
     Sample Category
    Tier 2
     Tissue Source
    retinal pigment epithelial cell
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESNXH2OHP
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    anti-SON - log phase - untreated
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESHG1BAFV
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    input - log phase - untreated
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNES3LO4836
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    anti-SON - log phase - TPL
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESGL2W8HL
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    input - log phase - TPL
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESANW8A1W
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    anti-SON - log phase - DRB
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESAMOSDMC
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    input - log phase - DRB
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESF79UZDD
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    anti-SON - log phase - DMSO
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESFWZBI9T
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    input - log phase - DMSO
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESKYNUNSG
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    anti-SON - G1 phase - untreated
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESX8HKI1R
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    input - G1 phase - untreated
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESJ4OXHI8
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    anti-SON - G1 phase - TPL
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNES8TZOZ6N
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    input - G1 phase - TPL
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESGE6ZI4N
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    anti-SON - G1 phase - DRB
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESUP1S8J4
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    input - G1 phase - DRB
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESRI54D3Q
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    anti-SON - G1 phase - DMSO
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESVH1QC6Z
    TSA-seq
    RPE-hTERT (Tier 2)
    TSA-seq SON in treated RPE1 cells - G1 phase and log growth
    input - G1 phase - DMSO
    Target
    SON protein
    Andrew Belmont, ILLINOIS
    4DNESIUBFH6Q
    multiplexed FISH
    RPE-hTERT (Tier 2)
    Multiplexed FISH in RPE1 on Chr21
    sgNon-Targeting Control (for siCHD7)
    Target
    34 TADs in Chr21, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNES94LRC75
    multiplexed FISH
    RPE-hTERT (Tier 2)
    Multiplexed FISH in RPE1 on Chr21
    siCHD7 targeted knocked-down
    Target
    34 TADs in Chr21, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNES6W6XBUJ
    multiplexed FISH
    RPE-hTERT (Tier 2)
    Multiplexed FISH in RPE1 on Chr22
    sgNon-Targeting Control (for siCHD7)
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNESNGLW3S2
    multiplexed FISH
    RPE-hTERT (Tier 2)
    Multiplexed FISH in RPE1 on Chr22
    siCHD7 targeted knocked-down
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNES7YK6HTM
    ATAC-seq
    RPE-hTERT (Tier 2)
    bulk ATAC-seq in human eye tissue
    hTERT-RPE1 - F6 clone
    -
    Bing Ren, UCSD
    4DNES48BA2C8
    ATAC-seq
    RPE-hTERT (Tier 2)
    bulk ATAC-seq in human eye tissue
    hTERT-RPE1 - WT
    -
    Bing Ren, UCSD
    4DNESJWVEOAK
    ATAC-seq
    RPE-hTERT (Tier 2)
    bulk ATAC-seq in human eye tissue
    hTERT-RPE1 - G1 clone
    -
    Bing Ren, UCSD
    4DNES1TSS4EO
    ATAC-seq
    RPE-hTERT (Tier 2)
    bulk ATAC-seq in human eye tissue
    hTERT-RPE1 - D4 clone
    -
    Bing Ren, UCSD
    4DNES228OAL3
    ChIP-seq
    RPE-hTERT (Tier 2)
    ChIP-seq on hTert-RPE-1
    anti-WAPL
    Target
    WAPL protein
    Jesse Dixon, SALK