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  • ExperimentSetReplicate120
    • Project
    Lab
    Experiment Type
  • Transcription
  • RNA-seq120
    • Dataset
    Organism
    Sample Type
    Sample Tier
    Sample Category
    Sample
    Organ/System
    Tissue Source
    Publication
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  • Released120
    • Commendations
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    3 Common Properties
     Experiment Category
    Sequencing
     Assay Details
    No value
     Set Type
    Replicate
    120 Results
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNES9AFXLKY
    RNA-seq
    HCT116 (Tier 2)
    RNA-seq in HCT116
    auxin 12h treatment
    -
    Yijun Ruan, JAX
    4DNESDYKBYXZ
    RNA-seq
    HCT116 (Tier 2)
    RNA-seq in HCT116
    auxin 9h treatment
    -
    Yijun Ruan, JAX
    4DNES6MLCD63
    RNA-seq
    HCT116 (Tier 2)
    RNA-seq in HCT116
    auxin 6h treatment
    -
    Yijun Ruan, JAX
    4DNES5MRV8A5
    RNA-seq
    HCT116 (Tier 2)
    RNA-seq in HCT116
    auxin no treatment
    -
    Yijun Ruan, JAX
    4DNESEXYI8T6
    RNA-seq
    KH2 ESC differentiated to stem cell
    RNA-seq on mouse stem cells
    Epiblast stem cells (EPISC)
    -
    Effie Apostolou, CORNELL
    4DNESGNRORMX
    RNA-seq
    extraembryonic cell
    RNA-seq on mouse stem cells
    Extra embryonic stem cells (XEN)
    -
    Effie Apostolou, CORNELL
    4DNES9KYIC7L
    RNA-seq
    trophoblast cell
    RNA-seq on mouse stem cells
    Trophoblast stem cells (TSC)
    -
    Effie Apostolou, CORNELL
    4DNESL7UB3NT
    RNA-seq
    mouse embryonic stem cell
    RNA-seq on mouse stem cells
    Embryonic stem cell (ESC)
    -
    Effie Apostolou, CORNELL
    4DNESSQ5RWCM
    RNA-seq
    Treg - spleen - Foxp3+
    RNA-seq on maturing regulatory T cells (Treg)
    Mature TReg
    -
    Jesse Dixon, SALK
    4DNESI2CRWG9
    RNA-seq
    Tcon - spleen Foxp3-
    RNA-seq on maturing regulatory T cells (Treg)
    TCon (conventional T-cells, spleen)
    -
    Jesse Dixon, SALK
    4DNESAWC3AGQ
    RNA-seq
    "wannabe" Treg - thymus - Foxp3-KO
    RNA-seq on maturing regulatory T cells (Treg)
    Treg - Foxp3 KIKO - Foxp3 knockout
    -
    Jesse Dixon, SALK
    4DNESO1O58ZA
    RNA-seq
    Treg - thymus - Fox3p-GFP+
    RNA-seq on maturing regulatory T cells (Treg)
    Treg - Foxp3 KIKO - control
    -
    Jesse Dixon, SALK
    4DNES72JG5A6
    RNA-seq
    Treg - thymus - Foxp3-Thy1.1 WT
    RNA-seq on maturing regulatory T cells (Treg)
    Treg DSM - WT control
    -
    Jesse Dixon, SALK
    4DNES5OD1X3P
    RNA-seq
    Treg - thymus - Foxp3-Thy1.1 DSM
    RNA-seq on maturing regulatory T cells (Treg)
    Treg DSM - Foxp3 domain swap
    -
    Jesse Dixon, SALK
    4DNES4TX9GCH
    RNA-seq
    double-positive, alpha-beta thymocyte
    RNA-seq on maturing regulatory T cells (Treg)
    CD4+ CD8+ double positive
    -
    Jesse Dixon, SALK
    4DNES5NCWM56
    RNA-seq
    double-negative alpha beta thymocyte
    RNA-seq on maturing regulatory T cells (Treg)
    CD4- CD8- double negative
    -
    Jesse Dixon, SALK
    4DNES4ZZWKX4
    RNA-seq
    CD8-positive, alpha-beta thymocyte
    RNA-seq on maturing regulatory T cells (Treg)
    CD8+ Single positive
    -
    Jesse Dixon, SALK
    4DNESSTQIYDL
    RNA-seq
    CD4-positive, alpha-beta thymocyte
    RNA-seq on maturing regulatory T cells (Treg)
    CD4+ Single positive
    -
    Jesse Dixon, SALK
    4DNES9MG4OZU
    RNA-seq
    Treg precursor - CD25+ Foxp3-
    RNA-seq on maturing regulatory T cells (Treg)
    CD25+ TReg precursor
    -
    Jesse Dixon, SALK
    4DNES5JU7CSI
    RNA-seq
    Treg precursor - CD25+ Foxp3-low
    RNA-seq on maturing regulatory T cells (Treg)
    Foxp3-low TReg precursor
    -
    Jesse Dixon, SALK
    4DNESD56BYJU
    RNA-seq
    Treg Precursor cell
    RNA-seq on maturing regulatory T cells (Treg)
    Foxp3 TReg precursor
    -
    Jesse Dixon, SALK
    4DNESZ3WOUGT
    RNA-seq
    scid.adh
    RNA-seq on Scid.adh cells
    TCF1 KO
    -
    Golnaz Vahedi, UPENN
    4DNESSMH31W6
    RNA-seq
    scid.adh
    RNA-seq on Scid.adh cells
    empty vector control
    -
    Golnaz Vahedi, UPENN
    4DNESP15EH2N
    RNA-seq
    NIH3T3
    RNA-seq on NIH 3T3 cells
    induced expression of TCF1
    -
    Golnaz Vahedi, UPENN
    4DNESQAI59VQ
    RNA-seq
    NIH3T3
    RNA-seq on NIH 3T3 cells
    uninduced control
    -
    Golnaz Vahedi, UPENN