ExperimentSetReplicate

ExperimentSet4DNESVRIRDZV
released

RNA-seq on microglia (MG) from donor ARK-2021-005

   May 5th, 2025 at 8:10pm

Data Usage Guidelines  


Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
primary cells
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

5 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXJJ9WZPS
Bio Rep 1, Tec Rep 1
RNA-seq on cortical microglia
File
Read Positions (bam)
4DNFIP5KTWN2
38.5m
37.31m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXJJ9WZPS
Bio Rep 1, Tec Rep 1
RNA-seq on cortical microglia
File
Gene Expression (tsv)
4DNFIBGREUOA
9.23m
6