Included Properties
Data Type
Project
Lab
Experiment Type
Dataset
Organism
Sample Type
Sample Tier
Sample Category
Sample
Organ/System
Tissue Source
Publication
Modifications
Treatments
Center
Status
Warnings
4 Common Properties
Experiment Category
Sequencing
Assay Details
Enzyme: DNaseI
Set Type
Replicate
Commendations
No value
25 Results
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
DNase Hi-C
RUES2 differentiated to endothelial cell
DNase Hi-C on human iPSCs differentiated to endothelium
endothelial cell - day 14
Enzyme
DNaseI
DNase Hi-C
RUES2 differentiated to endothelial progenitor cell
DNase Hi-C on human iPSCs differentiated to endothelium
endothelial progenitor - day 6
Enzyme
DNaseI
DNase Hi-C
RUES2 differentiated to mesoderm
DNase Hi-C on human iPSCs differentiated to endothelium
mesoderm - day 2
Enzyme
DNaseI
DNase Hi-C
RUES2
DNase Hi-C on human iPSCs differentiated to endothelium
undifferentiated - day 0
Enzyme
DNaseI
DNase Hi-C
LMNA-R225X-het with LMNA-R225X corrected to wild-type by Crispr
Hi-C on lamin A/C haploinsufficient hiPSC-derived cardiomyocytes
CRISPR corrected LMNA het R225X mutation to R225R - Clone 38
Enzyme
DNaseI
DNase Hi-C
LMNA-R225X-het with LMNA-R225X corrected to wild-type by Crispr
Hi-C on lamin A/C haploinsufficient hiPSC-derived cardiomyocytes
CRISPR corrected LMNA het R225X mutation to R225R - Clone 15
Enzyme
DNaseI
DNase Hi-C
LMNA-R225X-het
Hi-C on lamin A/C haploinsufficient hiPSC-derived cardiomyocytes
Heterozygous LMNA nonsense mutation R225X
Enzyme
DNaseI
DNase Hi-C
WTC-11 (Tier 1)
Hi-C on WTC-11 differentiation to cardiomyocytes
cardiomyocytes
Enzyme
DNaseI
DNase Hi-C
WTC-11 (Tier 1)
Hi-C on WTC-11 differentiation to cardiomyocytes
cardiac progenitors
Enzyme
DNaseI
DNase Hi-C
WTC-11 (Tier 1)
Hi-C on WTC-11 differentiation to cardiomyocytes
mesoderm
Enzyme
DNaseI
DNase Hi-C
WTC-11 (Tier 1)
Hi-C on WTC-11 differentiation to cardiomyocytes
undifferentiated
Enzyme
DNaseI
DNase Hi-C
HeLa-S3
DNase Hi-C in Hela-S3 cells +/- SF3B1 siRNA
treated with SF3B1 siRNA
Enzyme
DNaseI
DNase Hi-C
HeLa-S3
DNase Hi-C in Hela-S3 cells +/- SF3B1 siRNA
treated with control scrambled siRNA
Enzyme
DNaseI
DNase Hi-C
Patski
DNase Hi-C on Patski +/- Ds-TR and Dxz4 region modfications
Crispr deletion of 37 kb including Ds-TR gene
Enzyme
DNaseI
DNase Hi-C
Patski
DNase Hi-C on Patski +/- Ds-TR and Dxz4 region modfications
Crispr generated inversion of CTCF site in GRCm38:X:75674046-75674952
Enzyme
DNaseI
DNase Hi-C
Patski
DNase Hi-C on Patski +/- Ds-TR and Dxz4 region modfications
Crispr inversion of 44 kb including Dxz4 gene
Enzyme
DNaseI
DNase Hi-C
Patski
DNase Hi-C on Patski +/- Ds-TR and Dxz4 region modfications
Crispr deletion of 44 kb including Dxz4 gene
Enzyme
DNaseI
DNase Hi-C
Patski
DNase Hi-C on Patski +/- Ds-TR and Dxz4 region modfications
Crispr deletion of 127 kb 'hinge' region near Dxz4 gene
Enzyme
DNaseI
DNase Hi-C
Patski
DNase Hi-C on Patski +/- Ds-TR and Dxz4 region modfications
WT
Enzyme
DNaseI
DNase Hi-C
RUES2
DNAse Hi-C on RUES cell differentiation to cardiomyocytes
cardiomyocytes
Enzyme
DNaseI
DNase Hi-C
RUES2
DNAse Hi-C on RUES cell differentiation to cardiomyocytes
cardiac progenitors
Enzyme
DNaseI
DNase Hi-C
RUES2
DNAse Hi-C on RUES cell differentiation to cardiomyocytes
mesoderm
Enzyme
DNaseI
DNase Hi-C
RUES2
DNAse Hi-C on RUES cell differentiation to cardiomyocytes
undifferentiated
Enzyme
DNaseI
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