ExperimentSetReplicate

ExperimentSet4DNES21D8SP8
released

MicroC Libraries from H1ESC cells from 2 biological replicates, FA and DSG cross-linked, MNase digestion

   February 19th, 2019 at 3:46pm
Source Publication
Ultrastructural details of mammalian chromosome architecture
Nils Krietenstein, Sameer Abraham, et al., bioRxiv 2019

Note: This Experiment Set Supersedes - 4DNES21D8SP8  


This experiment set supercedes 4DNESRCFT5AI because new biological replicates were added.

Experiment Set Properties  


Set Type 
Replicate
Organism 
Biosource Type 
stem cell derived cell line
Biosource 
H1-hESC (Tier 1)
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Enzyme: MNase

40 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSC8TU4XY
Bio Replicate 1
Experiment
4DNEXQMEU2O4
Tech Replicate 1
Pair 1
11.83 GB
50
  Pass
365.46m
10.83 GB
50
  Pass
365.46m
Pair 2
10.62 GB
50
  Pass
330.5m
9.98 GB
50
  Pass
330.5m
Pair 3
3.18 GB
50
  Pass
95.99m
2.97 GB
50
  Pass
95.99m
Experiment
4DNEX24VTARO
Tech Replicate 2
Pair 1
11.6 GB
50
  Pass
343.8m
10.4 GB
50
  Pass
343.8m
Pair 2
10.78 GB
50
  Pass
328.87m
9.92 GB
50
  Pass
328.87m
Pair 3
2.55 GB
50
  Pass
73.98m
2.32 GB
50
  Pass
73.98m
Experiment
4DNEX9JAVMKE
Tech Replicate 3
Pair 1
10.88 GB
50
  Pass
320.55m
9.73 GB
50
  Pass
320.55m
Pair 2
10.64 GB
50
  Pass
325.53m
9.89 GB
50
  Pass
325.53m
Pair 3
2.38 GB
50
  Pass
70.25m
2.21 GB
50
  Pass
70.25m
Experiment
4DNEXWHALJ1K
Tech Replicate 4
Pair 1
11.85 GB
50
  Pass
371.44m
10.87 GB
50
  Pass
371.44m
Pair 2
10.93 GB
50
  Pass
346.85m
10.25 GB
50
  Pass
346.85m
Pair 3
2.75 GB
50
  Pass
84.08m
2.61 GB
50
  Pass
84.08m
Biosample
4DNBSTNNFD79
Bio Replicate 2
Experiment
4DNEXQQM6EMK
Tech Replicate 1
Pair
10.46 GB
50
  Pass
334.68m
11.42 GB
50
  Pass
334.68m
Experiment
4DNEXACM6M51
Tech Replicate 2
Pair
9.84 GB
50
  Pass
327.61m
10.76 GB
50
  Pass
327.61m
Experiment
4DNEX2WPDBN7
Tech Replicate 3
Pair 1
10.18 GB
50
  Pass
361.56m
11.21 GB
50
  Pass
361.56m
Pair 2
10.24 GB
50
  Pass
370.39m
11.25 GB
50
  Pass
370.39m
Experiment
4DNEXCL5AQ32
Tech Replicate 4
Pair 1
10.03 GB
50
  Pass
350.37m
11.07 GB
50
  Pass
350.37m
Pair 2
10.18 GB
50
  Pass
357.46m
11.22 GB
50
  Pass
357.46m
Experiment
4DNEXJPSM64Q
Tech Replicate 5
Pair 1
10.24 GB
50
  Pass
364.92m
11.19 GB
50
  Pass
364.92m
Pair 2
10.38 GB
50
  Pass
366.93m
11.26 GB
50
  Pass
366.93m