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Properties

Experiment Type
Assay Details
Warnings
15 Common Properties
 Project
4DN
 Experiment Category
Microscopy
 Organism
Human
 Sample Type
immortalized cells
 Sample Tier
Unclassified
 Sample Category
HFF (c6 or hTERT)
 Sample
HFF-hTERT
 Tissue Source
skin fibroblast
 Publication
Finn EH et al. (2019) Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
 Modifications
No value
 Treatments
No value
 Center
NOFIC - Dekker
 Status
Released
 Commendations
No value
 Validation Errors
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
Chromosomes, GRCh38:4:152319856-152499280 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:152521628-152677396 region, Chromosomes, GRCh38:4:153155365-153328553 region, GRCh38:4:151276234-151444375 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:151276234-151444375 region, GRCh38:4:151942840-152102227 region, GRCh38:4:153155365-153328553 region, Chromosomes
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:152521628-152677396 region, Chromosomes, GRCh38:4:151942840-152102227 region, GRCh38:4:151276234-151444375 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:153567330-153719454 region, GRCh38:4:152712784-152899106 region, Chromosomes, GRCh38:4:152319856-152499280 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:152712784-152899106 region, GRCh38:4:151542617-151679223 region, Chromosomes, GRCh38:4:153567330-153719454 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:153567330-153719454 region, GRCh38:4:151542617-151679223 region, Chromosomes, GRCh38:4:152319856-152499280 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:152712784-152899106 region, GRCh38:4:151542617-151679223 region, Chromosomes, GRCh38:4:152319856-152499280 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:153567330-153719454 region, Chromosomes, GRCh38:4:152712784-152899106 region, GRCh38:4:150978277-151124968 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:153567330-153719454 region, Chromosomes, GRCh38:4:152319856-152499280 region, GRCh38:4:150978277-151124968 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:150978277-151124968 region, GRCh38:4:152712784-152899106 region, Chromosomes, GRCh38:4:152319856-152499280 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:153567330-153719454 region, Chromosomes, GRCh38:4:151542617-151679223 region, GRCh38:4:150978277-151124968 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
Chromosomes, GRCh38:4:151542617-151679223 region, GRCh38:4:150978277-151124968 region, GRCh38:4:152712784-152899106 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:150978277-151124968 region, GRCh38:4:151542617-151679223 region, Chromosomes, GRCh38:4:152319856-152499280 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:150978277-151124968 region, Chromosomes
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:55236649-55437873 region, Chromosomes
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
Chromosomes, GRCh38:4:151542617-151679223 region, GRCh38:4:150978277-151124968 region, GRCh38:4:151276234-151444375 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:151942840-152102227 region, GRCh38:4:151542617-151679223 region, Chromosomes, GRCh38:4:152319856-152499280 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:152521628-152677396 region, Chromosomes, GRCh38:4:152319856-152499280 region, GRCh38:4:152712784-152899106 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:153567330-153719454 region, Chromosomes, GRCh38:4:153347384-153505952 region, GRCh38:4:153155365-153328553 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:54270488-54435016 region, GRCh38:4:54542457-54695030 region, Chromosomes, GRCh38:4:54794388-54995522 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:55053142-55196692 region, Chromosomes, GRCh38:4:54794388-54995522 region, GRCh38:4:55236649-55437873 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:55439495-55586511 region, GRCh38:4:55236649-55437873 region, Chromosomes, GRCh38:4:55367316-55516239 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
Chromosomes, GRCh38:4:55586513-55775729 region, GRCh38:4:55771263-55948311 region, GRCh38:4:55439495-55586511 region
DNA FISH
HFF-hTERT
DNA FISH on Chr4
-
Target
GRCh38:4:55771263-55948311 region, Chromosomes, GRCh38:4:56020676-56178582 region, GRCh38:4:56298731-56485483 region