ExperimentSetReplicate

ExperimentSet4DNESSCMBT9K
released
View JSON

DNA Paint on HFF Htert cells with 3 loci

   August 3rd, 2018 at 1:11pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:4:152521628-152677396 region, GRCh38:4:152319856-152499280 region, GRCh38:4:152712784-152899106 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:4:152521628-152677396 region targeted by Alexa Fluor 568-labeled BAC
ch02
GRCh38:4:152319856-152499280 region targeted by Alexa Fluor 488-labeled BAC
ch03
GRCh38:4:152712784-152899106 region targeted by Cy5-labeled BAC

1 Processed File

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESSCMBT9K
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
File
File Type
File Size
Experiment
4DNEXV35ARE4
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
-
-
-
Experiment
4DNEXVOMC83P
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
-
-
-
Experiment
4DNEXXVVYCAD
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
-
-
-