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Properties

Experiment Type
Organ/System
Publication
Assay Details
Warnings
14 Common Properties
 Project
4DN
 Lab
Job Dekker, UMMS
 Experiment Category
Sequencing
 Dataset
Hi-C on HFF cells - protocol variations
 Organism
Human
 Sample Type
immortalized cells
 Sample Tier
Unclassified
 Sample Category
HFF (c6 or hTERT)
 Tissue Source
skin fibroblast
 Modifications
No value
 Treatments
No value
 Center
NOFIC - Dekker
 Status
Released
 Commendations
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Formaldehyde, DpnII
Enzyme
DpnII
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Formaldehyde, DdeI
Enzyme
DdeI
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Formaldehyde+EGS, HindIII
Enzyme
HindIII
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Formaldehyde+EGS, DpnII
Enzyme
DpnII
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Formaldehyde+EGS, DdeI
Enzyme
DdeI
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Formaldehyde+DSG, HindIII
Enzyme
HindIII
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Formaldehyde+DSG, DpnII
Enzyme
DpnII
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Formaldehyde+DSG, DdeI
Enzyme
DdeI
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Enzyme NcoI - in situ Hi-C on HFF-hTERT cells grown on beads
Enzyme
NcoI
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Enzyme HindIII - in situ Hi-C on HFF-hTERT cells grown on beads
Enzyme
HindIII
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Enzyme HindIII - in situ Hi-C on HFF cells grown on plate
Enzyme
HindIII
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Enzyme MboI - in situ Hi-C on HFF cells grown on beads
Enzyme
MboI
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Enzyme DpnII - in situ Hi-C on HFF cells grown on beads
Enzyme
DpnII
- fin -