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Properties

Treatments
Assay Details
Warnings
15 Common Properties
 Project
4DN
 Lab
Arjun Raj, UPENN
 Experiment Category
Microscopy
 Experiment Type
RNA FISH
 Organism
Mouse
 Sample Type
stem cells
 Sample Tier
Unclassified
 Sample Category
Mouse stem cell
 Sample
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
 Organ/System
No value
 Tissue Source
stem cell
 Publication
Bartman CR et al. (2018) PMID:30554946
 Modifications
No value
 Center
NT - Raj
 Commendations
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH +/- 13h GATA-1 induction
gata2 probe, differentiated
Target
Chromosomes, GRCm38:6:88193891-88207032 mouse region
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH +/- 13h GATA-1 induction
gata2 probe, undifferentiated
Target
Chromosomes, GRCm38:6:88193891-88207032 mouse region
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH +/- 13h GATA-1 induction
myc probe, differentiated
Target
Chromosomes, GRCm38:15:61985341-61990361 mouse region
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH +/- 13h GATA-1 induction
myc probe, undifferentiated
Target
Chromosomes, GRCm38:15:61985341-61990361 mouse region
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH +/- 13h GATA-1 induction
myc, kit, calr probes, differentiated
Target
Chromosomes, GRCm38:15:61985341-61990361 mouse region, GRCm38:5:75574987-75656722 mouse region, GRCm38:8:84842088-84846931 mouse region
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH +/- 13h GATA-1 induction
myc, kit, calr probes, undifferentiated
Target
Chromosomes, GRCm38:15:61985341-61990361 mouse region, GRCm38:5:75574987-75656722 mouse region, GRCm38:8:84842088-84846931 mouse region
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH +/- 13h GATA-1 induction
kit, calr probes, differentiated
Target
Chromosomes, GRCm38:5:75574987-75656722 mouse region, GRCm38:8:84842088-84846931 mouse region
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH +/- 13h GATA-1 induction
kit, calr probes, undifferentiated
Target
Chromosomes, GRCm38:5:75574987-75656722 mouse region, GRCm38:8:84842088-84846931 mouse region
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH +/- 13h GATA-1 induction
prdx2, pabpc1 probes, differentiated
Target
Chromosomes, GRCm38:8:84969622-84974811 mouse region, GRCm38:15:36595658-36608973 mouse region
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH +/- 13h GATA-1 induction
prdx2, pabpc1 probes, undifferentiated
Target
Chromosomes, GRCm38:8:84969622-84974811 mouse region, GRCm38:15:36595658-36608973 mouse region
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH +/- 13h GATA-1 induction
hbb-b1 probe, differentiated
Target
Chromosomes, GRCm38:7:103826534-103827928 mouse region
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH +/- 13h GATA-1 induction
hbb-b1 probe, undifferentiated
Target
Chromosomes, GRCm38:7:103826534-103827928 mouse region
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