ExperimentSetReplicate

ExperimentSet4DNESNKZEXXO
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RNA FISH of Kit and Calr intronic regions in G1E-ER4 cells

   September 14th, 2018 at 4:59pm
Source Publication
Transcriptional Burst Initiation and Polymerase Pause Release Are Key Control Points of Transcriptional Regulation.
Bartman CR, Hamagami N, et al., Molecular cell 2018

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
Experiment Type(s) 
RNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCm38:5:75574987-75656722 mouse region, GRCm38:8:84842088-84846931 mouse region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCm38:5:75574987-75656722 mouse region targeted by Cy5-labeled custom oligos
ch02
GRCm38:8:84842088-84846931 mouse region targeted by Cy3-labeled custom oligos

8 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEXZHPON5V
Bio Rep 1, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIKJWPBJ8
csv
19.61 kB
File
4DNFI18MSA7G
coordinates (csv)
4.32 kB
File
4DNFIVNYOM9F
csv
17.76 kB
File
4DNFI9Q97B2F
coordinates (csv)
3.96 kB
Experiment
4DNEXN85IFZY
Bio Rep 2, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIFU8SPKZ
csv
23.2 kB
File
4DNFITIA6U3K
coordinates (csv)
6.3 kB
File
4DNFIH8I5Z93
csv
18.55 kB
File
4DNFI7EJV7Z2
coordinates (csv)
4.67 kB