ExperimentSetReplicate

ExperimentSet4DNESBVH64SG
released
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RNA FISH of Kit and Calr intronic regions in G1E-ER4 cells differentiated for 13 hours

   September 14th, 2018 at 4:59pm
Source Publication
Transcriptional Burst Initiation and Polymerase Pause Release Are Key Control Points of Transcriptional Regulation.
Bartman CR, Hamagami N, et al., Molecular cell 2018

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
Experiment Type(s) 
RNA FISH
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
Target: Chromosomes, GRCm38:5:75574987-75656722 mouse region, GRCm38:8:84842088-84846931 mouse region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCm38:5:75574987-75656722 mouse region targeted by Cy5-labeled custom oligos
ch02
GRCm38:8:84842088-84846931 mouse region targeted by Cy3-labeled custom oligos

8 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEXVJHRA23
Bio Rep 1, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFI7J6I86Q
csv
11.52 kB
File
4DNFI34OSHFI
coordinates (csv)
1.17 kB
File
4DNFIKAN1TA7
csv
14.36 kB
File
4DNFIBNYHLFS
coordinates (csv)
2.12 kB
Experiment
4DNEXGJ75182
Bio Rep 2, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIC997Z7Y
csv
13.69 kB
File
4DNFIZTOFMEY
coordinates (csv)
1.18 kB
File
4DNFIZ351OAM
csv
17.26 kB
File
4DNFI713RI63
coordinates (csv)
2.7 kB