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Included Properties

Data Type
  • ExperimentSetReplicate13
  • Experiment Set13
    • Experiment Type
  • Hi-C
  • in situ Hi-C13
  • FISH
  • DNA FISH245
  • Hi-C
  • Micro-C3
  • Dilution Hi-C1
    • Sample
  • HFF-hTERT13
    • Organ/System
    Publication
    Assay Details
    Set Type
  • Replicate13
    • Warnings
    14 Common Properties
     Project
    4DN
     Lab
    Job Dekker, UMMS
     Experiment Category
    Sequencing
     Dataset
    Hi-C on HFF cells - protocol variations
     Organism
    Human
     Sample Type
    immortalized cells
     Sample Tier
    Unclassified
     Sample Category
    HFF (c6 or hTERT)
     Tissue Source
    skin fibroblast
     Modifications
    No value
     Treatments
    No value
     Center
    NOFIC - Dekker
     Status
    Released
     Commendations
    No value
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESU36SE4V
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Formaldehyde, DpnII
    Enzyme
    DpnII
    Job Dekker, UMMS
    4DNESQSPD7TW
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Formaldehyde, DdeI
    Enzyme
    DdeI
    Job Dekker, UMMS
    4DNESI12RYYJ
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Formaldehyde+EGS, HindIII
    Enzyme
    HindIII
    Job Dekker, UMMS
    4DNESNIUM3LC
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Formaldehyde+EGS, DpnII
    Enzyme
    DpnII
    Job Dekker, UMMS
    4DNESD2QXAG5
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Formaldehyde+EGS, DdeI
    Enzyme
    DdeI
    Job Dekker, UMMS
    4DNESHQDSZZK
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Formaldehyde+DSG, HindIII
    Enzyme
    HindIII
    Job Dekker, UMMS
    4DNESUF2DBH1
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Formaldehyde+DSG, DpnII
    Enzyme
    DpnII
    Job Dekker, UMMS
    4DNESDBUUEL9
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Formaldehyde+DSG, DdeI
    Enzyme
    DdeI
    Job Dekker, UMMS
    4DNESY859VLG
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Enzyme NcoI - in situ Hi-C on HFF-hTERT cells grown on beads
    Enzyme
    NcoI
    Job Dekker, UMMS
    4DNESB6MNCFE
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Enzyme HindIII - in situ Hi-C on HFF-hTERT cells grown on beads
    Enzyme
    HindIII
    Job Dekker, UMMS
    4DNES8J78WV2
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Enzyme HindIII - in situ Hi-C on HFF cells grown on plate
    Enzyme
    HindIII
    Job Dekker, UMMS
    4DNESAPF27TG
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Enzyme MboI - in situ Hi-C on HFF cells grown on beads
    Enzyme
    MboI
    Job Dekker, UMMS
    4DNESVUMGLG2
    in situ Hi-C
    HFF-hTERT
    Hi-C on HFF cells - protocol variations
    Enzyme DpnII - in situ Hi-C on HFF cells grown on beads
    Enzyme
    DpnII
    Job Dekker, UMMS
    - fin -