ExperimentSetReplicate

ExperimentSet4DNESRZICP5J
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Late fraction S-phase Repliseq on v6.5 mESCs with YY1 degron without dTAG treatment - 2 replicates were grown and BrdU-labeled individually prior to FACS sorting

   November 15th, 2019 at 6:56pm
Source Publication
Identifying cis Elements for Spatiotemporal Control of Mammalian DNA Replication.
Sima J, Chakraborty A, et al., Cell 2019

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
V6.5 with YY1-dTAG
Experiment Type(s) 
2-stage Repli-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Fraction: late of 2 fractions

4 Processed Files

Quality Metrics

Experiment
For File
Total Aligned
Removed Duplicates
Details
Experiment
4DNEXWGI61YU
Bio Rep 1, Tec Rep 1
2-stage Repli-seq on V6.5 with YY1-dTAG S-phase late
File
Alignments (bam)
4DNFIJGQE29U
45.51m
11.436%
Experiment
4DNEXJBB5HCY
Bio Rep 2, Tec Rep 1
2-stage Repli-seq on V6.5 with YY1-dTAG S-phase late
File
Alignments (bam)
4DNFIBFVQJQB
38.8m
12.76%