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56151 Results

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Data Type
  • File56151
    • Project
    Experiment Type
    Assay Details
    Biosource
    File Properties
    File Type
    File Format
    File Size
    Generating Lab
    Experimental Lab
    Input of Workflow
    Output of Workflow
    replicate_info
  • No value7586
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    Title
    Type
    Experiment Type
    Dataset
    Condition
    Assay Details
    Biosource
    File Type
    File Format
    In experiment as
    Replicate info
    Generating Lab
    Experimental Lab
    File Size
    Experiment Set
    4DNFIU5R9JMY.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in RPE1 on Chr22
    sgNon-Targeting Control (for siCHD7)
    27 TADs in Chr22, Chromosomes, Geminin
    RPE-hTERT (Tier 2)
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    1.13 MB
    4DNES6W6XBUJ
    4DNFIHKOKF9M.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in RPE1 on Chr22
    siCHD7 targeted knocked-down
    27 TADs in Chr22, Chromosomes, Geminin
    RPE-hTERT (Tier 2)
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    1.66 MB
    4DNESNGLW3S2
    4DNFIPKU7685.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in RPE1 on Chr21
    sgNon-Targeting Control (for siCHD7)
    34 TADs in Chr21, Chromosomes, Geminin
    RPE-hTERT (Tier 2)
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    2.33 MB
    4DNESIUBFH6Q
    4DNFI7A349T7.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in RPE1 on Chr21
    siCHD7 targeted knocked-down
    34 TADs in Chr21, Chromosomes, Geminin
    RPE-hTERT (Tier 2)
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    527.74 kB
    4DNES94LRC75
    4DNFIOXTQT5K.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in neural crest cells on Chr22
    sgNon-Targeting Control (for shCHD7)
    27 TADs in Chr22, Chromosomes, Geminin
    H1-hESC differentiated to neural progenitor cell
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    6.89 MB
    4DNESB7SZY5Q
    4DNFIRX951K7.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in neural crest cells on Chr22
    shCHD7 targeted knocked-down
    27 TADs in Chr22, Chromosomes, Geminin
    H1-hESC differentiated to neural progenitor cell
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    11.27 MB
    4DNESHA7AS6L
    4DNFIJTVPCAI.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in A549-Cas9 on Chr22
    137 genes knocked-down (using 404 sgRNAs and 8 sgNTC)
    27 TADs in Chr22, Chromosomes, Geminin
    A549
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    119.08 MB
    4DNES7J5VP92
    4DNFI7XUQN2H.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in A549-Cas9 on Chr22
    137 genes knocked-down (using 404 sgRNAs and 8 sgNTC)
    27 TADs in Chr22, Chromosomes, Geminin
    A549
    FOF-CT - Trace Data
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    856.2 kB
    4DNES7J5VP92
    4DNFIPL3924X.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in A549-Cas9 on Chr22
    sgNon-Targeting Control (for siCHD7)
    27 TADs in Chr22, Chromosomes, Geminin
    A549
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    6.02 MB
    4DNESDOIAUSY
    4DNFI6HEE4U3.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in A549-Cas9 on Chr22
    siCHD7 targeted knocked-down
    27 TADs in Chr22, Chromosomes, Geminin
    A549
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    6.87 MB
    4DNES1S6LQKZ
    4DNFICAK73AG.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in A549-Cas9 on Chr22
    sgNon-Targeting Control (for sgZNF114)
    27 TADs in Chr22, Chromosomes, Geminin
    A549
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    7.37 MB
    4DNESNWDMERJ
    4DNFIL6ZVN4W.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in A549-Cas9 on Chr22
    sgZNF114 targeted knockdown
    27 TADs in Chr22, Chromosomes, Geminin
    A549
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    8.7 MB
    4DNES6RGJOMK
    4DNFI4WY31CZ.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in A549-Cas9 on Chr22
    sgNon-Targeting Control (for sgPCBP1)
    27 TADs in Chr22, Chromosomes, Geminin
    A549
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    6.91 MB
    4DNESYSJOREU
    4DNFIZUNMILA.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in A549-Cas9 on Chr22
    sgPCBP1 targeted knockdown
    27 TADs in Chr22, Chromosomes, Geminin
    A549
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    8.84 MB
    4DNESTEL2MX4
    4DNFIBI97KHO.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in A549-Cas9 on Chr22
    GFP over-expression, Control (for CHD7 OE)
    27 TADs in Chr22, Chromosomes, Geminin
    A549
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    6.36 MB
    4DNES6SPZBS6
    4DNFIEIQN2CR.csv
    FileProcessed
    multiplexed FISH
    Multiplexed FISH in A549-Cas9 on Chr22
    CHD7 over-expression
    27 TADs in Chr22, Chromosomes, Geminin
    A549
    FOF-CT - DNA-spot/trace Core
    csv
    processed file
    Biorep 1, Techrep 1
    Siyuan Wang, YALE
    Siyuan Wang, YALE
    2.37 MB
    4DNES5UHPM9B
    4DNFI6ITMDQS.matrix
    FileProcessed
    sci-RNA-seq
    sciRNA-seq on mixed species and organs
    chicken heart
    -
    heart
    Gene-cell Expression Matrix
    matrix
    Analysis results provided by the data submitters - the Deng Lab
    merged replicates
    Xinxian Deng, UW
    Xinxian Deng, UW
    66.12 MB
    4DNESFBNCNZW
    4DNFIFI3FWM9.matrix
    FileProcessed
    sci-RNA-seq
    sciRNA-seq on mixed species and organs
    chicken brain
    -
    brain
    Gene-cell Expression Matrix
    matrix
    Analysis results provided by the data submitters - the Deng Lab
    merged replicates
    Xinxian Deng, UW
    Xinxian Deng, UW
    273.2 MB
    4DNESTECV5Q3
    4DNFIXHP9PZK.matrix
    FileProcessed
    sci-RNA-seq
    sciRNA-seq on mixed species and organs
    mouse heart
    -
    heart
    Gene-cell Expression Matrix
    matrix
    Analysis results provided by the data submitters - the Deng Lab
    unreplicated
    Xinxian Deng, UW
    Xinxian Deng, UW
    15.44 MB
    4DNESCPR9K17
    4DNFIZ2WJGJT.matrix
    FileProcessed
    sci-RNA-seq
    sciRNA-seq on mixed species and organs
    mouse brain
    -
    brain
    Gene-cell Expression Matrix
    matrix
    Analysis results provided by the data submitters - the Deng Lab
    unreplicated
    Xinxian Deng, UW
    Xinxian Deng, UW
    36.43 MB
    4DNESUVYMFW8
    4DNFIQZ22133.matrix
    FileProcessed
    sci-RNA-seq
    sciRNA-seq on mixed species and organs
    opposum brain
    -
    brain
    Gene-cell Expression Matrix
    matrix
    Analysis results provided by the data submitters - the Deng Lab
    merged replicates
    Xinxian Deng, UW
    Xinxian Deng, UW
    458.48 MB
    4DNESSQAODXS
    4DNFIR6L86SN.csv.gz
    FileProcessed
    sci-RNA-seq
    sciRNA-seq on mixed species and organs
    chicken heart
    -
    heart
    Cell Annotation
    compressed_csv
    Analysis results provided by the data submitters - the Deng Lab
    merged replicates
    Xinxian Deng, UW
    Xinxian Deng, UW
    571.63 kB
    4DNESFBNCNZW
    4DNFINCSHIBW.csv.gz
    FileProcessed
    sci-RNA-seq
    sciRNA-seq on mixed species and organs
    chicken brain
    -
    brain
    Cell Annotation
    compressed_csv
    Analysis results provided by the data submitters - the Deng Lab
    merged replicates
    Xinxian Deng, UW
    Xinxian Deng, UW
    1.02 MB
    4DNESTECV5Q3
    4DNFIL31TK1V.csv.gz
    FileProcessed
    sci-RNA-seq
    sciRNA-seq on mixed species and organs
    mouse heart
    -
    heart
    Cell Annotation
    compressed_csv
    Analysis results provided by the data submitters - the Deng Lab
    unreplicated
    Xinxian Deng, UW
    Xinxian Deng, UW
    105.77 kB
    4DNESCPR9K17
    4DNFILZRRBN1.csv.gz
    FileProcessed
    sci-RNA-seq
    sciRNA-seq on mixed species and organs
    mouse brain
    -
    brain
    Cell Annotation
    compressed_csv
    Analysis results provided by the data submitters - the Deng Lab
    unreplicated
    Xinxian Deng, UW
    Xinxian Deng, UW
    189.38 kB
    4DNESUVYMFW8