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Included Properties

Data Type
  • ExperimentSetReplicate118
    • Project
    Lab
    Experiment Type
  • Hi-C
  • Dilution Hi-C118
    • Dataset
    Organism
    Sample Type
    Sample Category
    Sample
    Organ/System
    Tissue Source
    Publication
    Modifications
    Treatments
    Assay Details
    Center
    Status
  • Released118
    • Warnings
    4 Common Properties
     Experiment Category
    Sequencing
     Sample Tier
    Unclassified
     Set Type
    Replicate
     Commendations
    No value
    118 Results
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESUCQ2Q6H
    Dilution Hi-C
    retinal neural layer
    Hi-C on inverted or conventional neurons
    Neurons
    Enzyme
    HindIII
    Job Dekker, UMMS
    4DNESIWJ86NK
    Dilution Hi-C
    retinal rod cell
    Hi-C on inverted or conventional neurons
    Rods
    Enzyme
    HindIII
    Job Dekker, UMMS
    4DNESUWH55N3
    Dilution Hi-C
    thymocyte with Lbr-/-
    Hi-C on thymocytes +/- Lbr
    CD1 Lbr-/- thymus
    Enzyme
    HindIII
    Job Dekker, UMMS
    4DNESX6A3WDX
    Dilution Hi-C
    thymocyte
    Hi-C on thymocytes +/- Lbr
    CD1 WT thymus
    Enzyme
    HindIII
    Job Dekker, UMMS
    4DNESDYFTSG5
    Dilution Hi-C
    GM19204
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM19204
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESG9UPQLY
    Dilution Hi-C
    GM19193
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM19193
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESOHWXJQY
    Dilution Hi-C
    GM19141
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM19141
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESQK7WJLT
    Dilution Hi-C
    GM19099
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM19099
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNES3HQPSLM
    Dilution Hi-C
    GM18522
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM18522
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNES3IV77UJ
    Dilution Hi-C
    GM18516
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM18516
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESZIREYB8
    Dilution Hi-C
    GM18508
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM18508
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESQXAEPXP
    Dilution Hi-C
    GM18507
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM18507
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESAZRVEQ8
    Dilution Hi-C
    GM18505
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM18505
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNES1H2O6N7
    Dilution Hi-C
    GM18486
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM18486
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESJ7ABWFM
    Dilution Hi-C
    HeLa cell line
    Hi-C on sync. SCC1-AID or CTCF-AID tagged Hela
    SCC1 degron, G1 phase synchronization, WALP RNAi depletion
    Enzyme
    HindIII
    Jan-Michael Peters, IMP
    4DNES51Q5X3O
    Dilution Hi-C
    HeLa cell line
    Hi-C on sync. SCC1-AID or CTCF-AID tagged Hela
    SCC1 degron, G1 phase synchronization, PDS5A/B RNAi depletion
    Enzyme
    HindIII
    Jan-Michael Peters, IMP
    4DNES6BKANVX
    Dilution Hi-C
    HeLa cell line
    Hi-C on sync. SCC1-AID or CTCF-AID tagged Hela
    SCC1 degron, G1 phase synchronization, WALP, PDS5A/B RNAi depletion
    Enzyme
    HindIII
    Jan-Michael Peters, IMP
    4DNESR8I1SZG
    Dilution Hi-C
    HeLa cell line
    Hi-C on sync. SCC1-AID or CTCF-AID tagged Hela
    SCC1 degron, Pro-Met phase synchronization, no RNAi treatment
    Enzyme
    HindIII
    Jan-Michael Peters, IMP
    4DNESNGGME6B
    Dilution Hi-C
    HeLa cell line
    Hi-C on sync. SCC1-AID or CTCF-AID tagged Hela
    SCC1 degron, S phase synchronization, no RNAi treatment
    Enzyme
    HindIII
    Jan-Michael Peters, IMP
    4DNES2PZV514
    Dilution Hi-C
    HeLa cell line
    Hi-C on sync. SCC1-AID or CTCF-AID tagged Hela
    SCC1 degron, G2 phase synchronization, no RNAi treatment
    Enzyme
    HindIII
    Jan-Michael Peters, IMP
    4DNESYPELBCB
    Dilution Hi-C
    HeLa cell line
    Hi-C on sync. SCC1-AID or CTCF-AID tagged Hela
    SCC1 degron, G1 phase synchronization, auxin treatment 15min
    Enzyme
    HindIII
    Jan-Michael Peters, IMP
    4DNESJAU6DPJ
    Dilution Hi-C
    HeLa cell line
    Hi-C on sync. SCC1-AID or CTCF-AID tagged Hela
    SCC1 degron, G1 phase synchronization, auxin treatment 180min
    Enzyme
    HindIII
    Jan-Michael Peters, IMP
    4DNESP399AP5
    Dilution Hi-C
    HeLa cell line
    Hi-C on sync. SCC1-AID or CTCF-AID tagged Hela
    SCC1 degron, G1 phase synchronization, auxin treatment 120min
    Enzyme
    HindIII
    Jan-Michael Peters, IMP
    4DNESLZVKJ7V
    Dilution Hi-C
    HeLa cell line
    Hi-C on sync. SCC1-AID or CTCF-AID tagged Hela
    wt, G1 phase synchronization
    Enzyme
    HindIII
    Jan-Michael Peters, IMP
    4DNESWO4PE7L
    Dilution Hi-C
    HeLa cell line
    Hi-C on sync. SCC1-AID or CTCF-AID tagged Hela
    CTCF degron, G1 phase synchronization, no auxin treatment
    Enzyme
    HindIII
    Jan-Michael Peters, IMP