Searchfor ExperimentSetReplicate

 

Properties

Assay Details
  • Target: Chromosomes, GRCh38:17:38743489-38939529 region, GRCh38:17:69261617-69425619 region, GRCh38:17:65509811-65678200 region1
  • Target: Chromosomes, GRCh38:17:9734635-9900986 region, GRCh38:17:38743489-38939529 region, GRCh38:17:21275223-21478206 region1
  • Target: Chromosomes, GRCh38:1:105256970-105427280 region, GRCh38:1:93528777-93687930 region, GRCh38:1:96067992-96226766 region1
  • Target: Chromosomes, GRCh38:1:22223362-22394657 region, GRCh38:1:18566409-18766880 region, GRCh38:1:2370445-2570720 region1
  • Target: GRCh38:17:36387556-36574537 region, GRCh38:17:35268046-35441605 region, Chromosomes, GRCh38:17:38743489-38939529 region1
  • Target: GRCh38:17:36387556-36574537 region, GRCh38:17:63767294-63927790 region, Chromosomes, GRCh38:17:65509811-65678200 region1
  • Target: GRCh38:17:36387556-36574537 region, GRCh38:17:9734635-9900986 region, GRCh38:17:21275223-21478206 region, Chromosomes1
  • Target: GRCh38:17:63767294-63927790 region, GRCh38:17:65509811-65678200 region, Chromosomes, GRCh38:17:38743489-38939529 region1
  • Target: GRCh38:17:9734635-9900986 region, GRCh38:17:69261617-69425619 region, GRCh38:17:21275223-21478206 region, Chromosomes1
  • Target: GRCh38:1:107482705-107645471 region, Chromosomes, GRCh38:1:248125293-248263553 region, GRCh38:1:12708719-12865743 region1
  • View 4 More4
    17 Common Properties
     Project
    4DN
     Lab
    Tom Misteli, NCI
     Experiment Type
    DNA FISH
     Organism
    Human
     Sample Type
    immortalized cells
     Sample Tier
    Unclassified
     Sample Category
    HFF (c6 or hTERT)
     Sample
    HFF-hTERT
     Tissue Source
    skin fibroblast
     Publication
    Finn EH et al. (2019) Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
     Modifications
    No value
     Treatments
    No value
     Center
    NOFIC - Dekker
     Set Type
    Replicate
     Status
    Released
     Commendations
    No value
     Validation Errors
    No value
    14 Results
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    Chromosomes, GRCh38:1:105256970-105427280 region, GRCh38:1:93528777-93687930 region, GRCh38:1:96067992-96226766 region
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    GRCh38:1:96067992-96226766 region, GRCh38:1:118815746-118989848 region, Chromosomes, GRCh38:1:115549997-115729561 region
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    GRCh38:1:97025755-97207860 region, Chromosomes, GRCh38:1:89759075-89913486 region, GRCh38:1:96067992-96226766 region
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    GRCh38:1:107482705-107645471 region, Chromosomes, GRCh38:1:248125293-248263553 region, GRCh38:1:22223362-22394657 region
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    Chromosomes, GRCh38:1:22223362-22394657 region, GRCh38:1:18566409-18766880 region, GRCh38:1:2370445-2570720 region
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    GRCh38:1:107482705-107645471 region, Chromosomes, GRCh38:1:248125293-248263553 region, GRCh38:1:12708719-12865743 region
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    GRCh38:1:18566409-18766880 region, Chromosomes, GRCh38:1:2370445-2570720 region, GRCh38:1:12708719-12865743 region
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    Chromosomes, GRCh38:17:38743489-38939529 region, GRCh38:17:69261617-69425619 region, GRCh38:17:65509811-65678200 region
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    GRCh38:17:9734635-9900986 region, GRCh38:17:69261617-69425619 region, GRCh38:17:21275223-21478206 region, Chromosomes
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    GRCh38:17:63767294-63927790 region, GRCh38:17:65509811-65678200 region, Chromosomes, GRCh38:17:38743489-38939529 region
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    Chromosomes, GRCh38:17:9734635-9900986 region, GRCh38:17:38743489-38939529 region, GRCh38:17:21275223-21478206 region
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    GRCh38:17:36387556-36574537 region, GRCh38:17:63767294-63927790 region, Chromosomes, GRCh38:17:65509811-65678200 region
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    GRCh38:17:36387556-36574537 region, GRCh38:17:35268046-35441605 region, Chromosomes, GRCh38:17:38743489-38939529 region
    DNA FISH
    HFF-hTERT
    DNA FISH on Chr1 and Chr17
    -
    Target
    GRCh38:17:36387556-36574537 region, GRCh38:17:9734635-9900986 region, GRCh38:17:21275223-21478206 region, Chromosomes
    - fin -