ExperimentSetReplicate

ExperimentSet4DNES1HCJRAW
released
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DNA Paint on HFF Htert cells with 3 loci

   August 8th, 2018 at 1:34pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:1:248125293-248263553 region, GRCh38:1:107482705-107645471 region, GRCh38:1:22223362-22394657 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:1:248125293-248263553 region targeted by Cy5-labeled BAC
ch02
GRCh38:1:107482705-107645471 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:1:22223362-22394657 region targeted by Alexa Fluor 488-labeled BAC

3 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNES1HCJRAW
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXVNM2VNG
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFICYDG69E
loci distances (txt)
96.28 kB
Experiment
4DNEX2RJR9U4
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFI4D5GIJG
loci distances (txt)
119.2 kB
Experiment
File
File Type
File Size
Experiment
4DNEXFRAIZ2N
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
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