ExperimentSetReplicate

ExperimentSet4DNESYBV35FN
released
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Rna-seq on mitotic precursor cerebellar granule neurons Pax6 high Ki67 high isolated using FANS from C57BL/6 mouse postnatal day 6

   March 27th, 2025 at 7:27pm
Source Publication
Reorganization of the heterochromatin-associated gene-dense subcompartment in early neuronal development.
Scrutton Alvarado NJ, Zhao Z, et al., Biology open 2025

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
mitotic cerebellar granule neuron precursor - PND6
Experiment Type(s) 
RNA-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
None

10 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXIGO19GA
Bio Rep 1, Tec Rep 1
RNA-seq on mitotic cerebellar granule neuron precursor - PND6
File
Read Positions (bam)
4DNFIWFCXSD7
28.58m
27.94m
Experiment
4DNEXNUQYW45
Bio Rep 2, Tec Rep 1
RNA-seq on mitotic cerebellar granule neuron precursor - PND6
File
Read Positions (bam)
4DNFI4A11GQB
28.94m
28.2m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXIGO19GA
Bio Rep 1, Tec Rep 1
RNA-seq on mitotic cerebellar granule neuron precursor - PND6
File
Gene Expression (tsv)
4DNFIERBERBM
10.1m
129.01k
Experiment
4DNEXNUQYW45
Bio Rep 2, Tec Rep 1
RNA-seq on mitotic cerebellar granule neuron precursor - PND6
File
Gene Expression (tsv)
4DNFIY21QCB4
11.48m
127.76k