ExperimentSetReplicate

Browser Suggestion

Google Chrome  or Mozilla Firefox are the recommended browser(s) for using the 4DN Data Portal.

Microsoft Edge, Safari, Opera etc. should work for a majority of portal functions but are not explicitly supported and may present some glitches, e.g. during submission.

ExperimentSet4DNESTTO3H2N
released
View JSON

Multiplexed FISH (ORCA) in wild-type double positive (DP) T-cells derived from C57BL-6 mice to target Ets1-Fli1 locus

   June 3rd, 2024 at 8:20pm

Note on FOF-CT file format  

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
primary cells
Sample 
double-positive, alpha-beta thymocyte
Experiment Type(s) 
multiplexed FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Ets1 mouse gene
Channel
Imaging Rounds
Path
 
ch00
1-60
900-kb region around Ets1-Fli1 locus targeted by Cy3-labeled fiducial probes (reference fiducial channel)
ch01
1-60
900-kb region around Ets1-Fli1 locus targeted by Alexa Fluor 647 labeled readout probes (readout channel)

2 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEXSTYC535
Bio Rep 1, Tec Rep 1
multiplexed FISH on double-positive, alpha-beta thymocyte
File
4DNFI5OF5LWK
FOF-CT - DNA-spot/trace core (csv)
5.73 MB
File
4DNFIMPCT3OK
FOF-CT - spot quality (csv)
7.56 MB