ExperimentSetReplicate

ExperimentSet4DNEST651P8O
released
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Late fraction S-phase Repliseq on H9-hESC Tier 2 cells - cells were grown, BrdU labeld and FACS sortied in 2 independent batches

   August 17th, 2017 at 4:08am

Data Usage Guidelines  

Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
stem cells
Sample 
H9 (Tier 2)
Experiment Type(s) 
2-stage Repli-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Fraction: late fraction of 2 fractions

4 Processed Files

Quality Metrics

Experiment
For File
Total Aligned
Removed Duplicates
Details
Experiment
4DNEXK7XIMBW
Bio Rep 1, Tec Rep 1
2-stage Repli-seq on H9 (Tier 2) S-phase late fraction
File
Alignments (bam)
4DNFI9JYRUGT
13.14m
58.77%
Experiment
4DNEXB7RB9KT
Bio Rep 2, Tec Rep 1
2-stage Repli-seq on H9 (Tier 2) S-phase late fraction
File
Alignments (bam)
4DNFI2HZCEYH
11.04m
1.857%