ExperimentSetReplicate

ExperimentSet4DNESRYMCY6W
released

Rna-seq on mature cerebellar granule neurons Pax6 mid-low NeuN high isolated using FANS from C57BL/6 mouse postnatal day 11

   March 27th, 2025 at 7:27pm
Source Publication

Data Usage Guidelines  


Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
primary cells
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

10 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXGWUG18W
Bio Rep 1, Tec Rep 1
RNA-seq on mature cerebellar granule neuron - PND11
File
Read Positions (bam)
4DNFIJFTI3JM
37.32m
36.48m
Experiment
4DNEX1D56I2M
Bio Rep 2, Tec Rep 1
RNA-seq on mature cerebellar granule neuron - PND11
File
Read Positions (bam)
4DNFIGGKDJBE
38.18m
37.33m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXGWUG18W
Bio Rep 1, Tec Rep 1
RNA-seq on mature cerebellar granule neuron - PND11
File
Gene Expression (tsv)
4DNFIY27UR9B
11.43m
103.2k
Experiment
4DNEX1D56I2M
Bio Rep 2, Tec Rep 1
RNA-seq on mature cerebellar granule neuron - PND11
File
Gene Expression (tsv)
4DNFIR7X8G4O
11.73m
80.86k