ExperimentSetReplicate

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ExperimentSet4DNESQ5KJOZB
released
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single cell methyl Hi-C on heterozygous Crispr modified TBX5 with 2 bp insertion causing frameshift WTC-11 iPSC cells differentiated for 20 days to artrial cardiac myocytes.

   December 19th, 2024 at 7:55pm
Source Publication
Dose-dependent sensitivity of human 3D chromatin to a heart disease-linked transcription factor.
Grant ZL, Kuang S, et al., bioRxiv : the preprint server for biology 2025

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
in vitro differentiated cells
Sample 
WTC-11 differentiated to cardiac muscle cell
Experiment Type(s) 
single cell Methyl Hi-C
Modification Type 
Crispr
Treatment Type 
None
Assay Details 
None

8 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBS3TQMSUQ
Bio Replicate 1
Experiment
4DNEXKVO9SSR
Tech Replicate 1
Pair 1
File
4DNFIF5T6OMA
17.11 GB
151
  Pass
284.3m
File
4DNFIJUI7SFP
17.23 GB
151
  Pass
284.3m
Pair 2
File
4DNFIS15DF2N
26 GB
151
  Pass
435.31m
File
4DNFIK7BB6B9
26.31 GB
151
  Pass
435.31m
Biosample
4DNBSWB3Z4FP
Bio Replicate 2
Experiment
4DNEX8GVY8H1
Tech Replicate 1
Pair 1
File
4DNFIP73MSVB
16.76 GB
151
  Pass
277.03m
File
4DNFITGTCXYC
16.97 GB
151
  Pass
277.03m
Pair 2
File
4DNFIHNUXBRZ
25.31 GB
151
  Pass
420.7m
File
4DNFIAA7TA3R
25.76 GB
151
  Pass
420.7m