ExperimentSetReplicate

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ExperimentSet4DNESOOH7CIO
released
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single cell methyl Hi-C on compound heterozygous Crispr modified TBX5 LOF with 1 bp deletion causing frameshift and 8 bp insertion in WTC-11 iPSC cells differentiated for 20 days to atrial cardiac myocytes.

   December 19th, 2024 at 7:55pm
Source Publication
Dose-dependent sensitivity of human 3D chromatin to a heart disease-linked transcription factor.
Grant ZL, Kuang S, et al., bioRxiv : the preprint server for biology 2025

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
in vitro differentiated cells
Sample 
WTC-11 differentiated to cardiac muscle cell
Experiment Type(s) 
single cell Methyl Hi-C
Modification Type 
Crispr
Treatment Type 
None
Assay Details 
None

8 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSGJYEI79
Bio Replicate 1
Experiment
4DNEXXM5E7ZZ
Tech Replicate 1
Pair 1
File
4DNFITIFOJUB
17.67 GB
151
  Pass
288.95m
File
4DNFILRFDRQG
17.79 GB
151
  Pass
288.95m
Pair 2
File
4DNFIA5KMDL2
27.34 GB
151
  Pass
449.82m
File
4DNFIQXCL6IV
27.66 GB
151
  Pass
449.82m
Biosample
4DNBSXHZAPYB
Bio Replicate 2
Experiment
4DNEXDUIXOEO
Tech Replicate 1
Pair 1
File
4DNFIPQU3EKI
16.74 GB
151
  Pass
279.35m
File
4DNFI47RENIN
16.88 GB
151
  Pass
279.35m
Pair 2
File
4DNFIIE16Z7P
25.72 GB
151
  Pass
432.25m
File
4DNFIVNKPPRZ
26.08 GB
151
  Pass
432.25m