ExperimentSetReplicate

ExperimentSet4DNESMTNNB3N
released

Genome-wide chromatin imaging by DNA-MERFISH of 2000 loci in mouse primary motor cortex, together with RNA-MERFISH of 240 gene transcripts

   November 15th, 2023 at 8:41pm
Source Publication

Note on FOF-CT file format  


FOF-CT Core files replaced  


The original FOF-CT Core files (4DNFIMCISOJB, 4DNFIM9T6MT5, 4DNFIC62S1V9, 4DNFI78AIUP8) have been replaced with the current version to correct the 'XYZ_unit' header from 'nm' to 'micron'.

Microscope configuration  


The experiments associated with this study are derived from either d8f51a9c-1e1a-4a6c-9432-ddf7de64e836 or f0172a96-2bf5-4e6a-938d-f205c6e728c9 microscopes


Experiment Set Properties  

16 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEX4L6B8F2
Bio Rep 1, Tec Rep 1
multiplexed FISH on primary motor cortex
FOF-CT - DNA-spot/trace core (csv)
1.35 GB
FOF-CT - spot demultiplexing (csv)
7.47 GB
FOF-CT - RNA-spot (csv)
1.71 GB
FOF-CT - cell data (csv)
19.19 MB
Experiment
4DNEXZTUN9TK
Bio Rep 2, Tec Rep 1
multiplexed FISH on primary motor cortex
FOF-CT - DNA-spot/trace core (csv)
1.39 GB
FOF-CT - spot demultiplexing (csv)
6.75 GB
FOF-CT - RNA-spot (csv)
1.41 GB
FOF-CT - cell data (csv)
14.43 MB
Experiment
4DNEX6ZNHHBS
Bio Rep 3, Tec Rep 1
multiplexed FISH on primary motor cortex
FOF-CT - DNA-spot/trace core (csv)
1.42 GB
FOF-CT - spot demultiplexing (csv)
8.16 GB
FOF-CT - RNA-spot (csv)
1.15 GB
FOF-CT - cell data (csv)
18.01 MB
Experiment
4DNEXBUVZYLI
Bio Rep 3, Tec Rep 2
multiplexed FISH on primary motor cortex
FOF-CT - DNA-spot/trace core (csv)
1.57 GB
FOF-CT - spot demultiplexing (csv)
7.29 GB
FOF-CT - RNA-spot (csv)
823.26 MB
FOF-CT - cell data (csv)
15.8 MB