ExperimentSetReplicate

ExperimentSet4DNESLO7U5XD
released

in situ ChIA-PET in GM12878 using RNAPII antibody

   September 27th, 2024 at 5:38pm
Source Publication
Multifaceted roles of cohesin in regulating transcriptional loops.
Kim M, Wang P, et al., bioRxiv : the preprint server for biology 2024

Note: Experiment items linked to 2 experiment sets (4DNESLO7U5XD, 4DNESZ25MOZV)  


This ExperimentSet contains files that are also part of 4DNESZ25MOZV.
The files 4DNFI5MV9Z7A, 4DNFIWUJKXCM, 4DNFIIFNCBM2, 4DNFIVCZCIMS (of experiment 4DNEXUNBCD3G) and files 4DNFIVR2ZQLN and 4DNFICD5DFCK (of experiment 4DNEXWDFTF5A) that were originally submitted as part of 4DNESZ25MOZV were added to this dataset and included in the analysis results.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
immortalized cells
Sample 
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: RNA Pol II

6 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSMEPWHTU
Bio Replicate 1
Experiment
4DNEXUNBCD3G
Tech Replicate 1
Pair 1
16.79 GB
151
  Pass
253.2m
17.42 GB
151
  Pass
253.2m
Pair 2
12.01 GB
151
  Pass
132.17m
11.99 GB
151
  Pass
132.17m
Biosample
4DNBSPXMMBLD
Bio Replicate 2
Experiment
4DNEX2HEPRYZ
Tech Replicate 1
Pair
32.33 GB
151
  Pass
494.49m
32.74 GB
151
  Pass
494.49m