ExperimentSetReplicate

ExperimentSet4DNESL5SGC7F
released

Rna-seq on immature cerebellar granule neurons Pax6 mid NeuN mid isolated using FANS from C57BL/6 mouse postnatal day 11

   March 27th, 2025 at 7:27pm
Source Publication

Data Usage Guidelines  


Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.


Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
primary cells
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
None

10 Processed Files

Quality Metrics

Experiment
For File
Total mapped reads (genome)
Total uniquely mapped reads (genome)
Details
Experiment
4DNEXEJT9JNL
Bio Rep 1, Tec Rep 1
RNA-seq on immature cerebellar granule neuron - PND11
File
Read Positions (bam)
4DNFITOXY5VL
30.89m
30.22m
Experiment
4DNEXDCOOR2K
Bio Rep 2, Tec Rep 1
RNA-seq on immature cerebellar granule neuron - PND11
File
Read Positions (bam)
4DNFIT1JCAD7
33.67m
32.93m
Experiment
For File
Reads mapped to protein-coding genes
Reads mapped to rRNA
Details
Experiment
4DNEXEJT9JNL
Bio Rep 1, Tec Rep 1
RNA-seq on immature cerebellar granule neuron - PND11
File
Gene Expression (tsv)
4DNFIFAPFARG
9.95m
87.03k
Experiment
4DNEXDCOOR2K
Bio Rep 2, Tec Rep 1
RNA-seq on immature cerebellar granule neuron - PND11
File
Gene Expression (tsv)
4DNFIH4NE916
11m
93.29k