ExperimentSetReplicate

ExperimentSet4DNESID7GI8N
released

Chromatin tracing of SOX9 locus in H9 hESCs with CTCF deletion at SOX9 promoter, differentiated to cranial neural crest cells. 52 sequential steps (steps #7-58 of the oligopaint library targeting the 4-Mb SOX9 locus) spaced 50 kb (each spot is 5 kb), 2.6 Mb in total.

   January 18th, 2023 at 9:25pm

Note on FOF-CT file format  



Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
in vitro differentiated cells
Experiment Type(s) 
Modification Type 
Crispr
Treatment Type 
None
Assay Details 
Target: 80 spaced regions at SOX9 locus

4 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEXDC587AV
Bio Rep 1, Tec Rep 1
multiplexed FISH on H9 differentiated to cranial neural crest
FOF-CT - DNA-spot/trace core (csv)
6.18 MB
FOF-CT - spot quality (csv)
1.57 MB
Experiment
4DNEXSV9TQCK
Bio Rep 2, Tec Rep 1
multiplexed FISH on H9 differentiated to cranial neural crest
FOF-CT - DNA-spot/trace core (csv)
3.04 MB
FOF-CT - spot quality (csv)
796.68 kB