ExperimentSetReplicate

ExperimentSet4DNESICWFYMM
released

ChIP-seq for H4K20me3 on HCT-116 (HCT-116-RAD21-mAC)

   May 15th, 2019 at 6:31pm
Source Publication
Cohesin Loss Eliminates All Loop Domains.
Rao SSP, Huang SC, et al., Cell 2017

Experiment Set Properties  


Set Type 
Replicate
Organism 
Sample Type 
immortalized cells
Experiment Type(s) 
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: H4K20me3

4 Processed Files

Quality Metrics

Experiment
For File
Nonredundant Read Fraction (NRF)
PCR Bottleneck Coefficient (PBC)
Filtered & Deduped Reads
Details
File
Read Positions (bed)
4DNFID1NMNWY
0.92
0.92
21.65m
Experiment
For File
Optimal Peaks
Rescue Ratio
Self Consistency Ratio
Fraction of Reads in Peaks
Details
From Multiple Experiments
4DNESICWFYMM
Multiple Experiments
File
Peaks (bigbed)
4DNFIMYKFY9Y
53.27k
0.0
1.0
0.13