ExperimentSetReplicate

ExperimentSet4DNESFVWYT4P
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Replicates of in situ Hi-C using MboI on diploid 1CDES cells

   September 19th, 2018 at 11:32am
Source Publication
Cell-cycle dynamics of chromosomal organization at single-cell resolution.
Nagano T, Lubling Y, et al., Nature 2017

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
F1 2-1 mESC line
Experiment Type(s) 
single cell Hi-C
Modification Type 
None
Treatment Type 
None
Assay Details 
Enzyme: MboI

18 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBS4BHLGB4
Bio Replicate 1
Experiment
4DNEX4F1DCC8
Tech Replicate 1
Pair 1
File
4DNFIK4IKR67
4.83 GB
151
  Pass
58.36m
File
4DNFIRL2CDG9
4.85 GB
151
  Pass
58.36m
Pair 2
File
4DNFIQHJWSY1
19.73 GB
151
  Pass
248.32m
File
4DNFIB8NCOGV
20.9 GB
151
  Pass
248.32m
Pair 3
File
4DNFIZCWHNMQ
14.68 GB
151
  Pass
184.57m
File
4DNFI1IBJ9A4
15.57 GB
151
  Pass
184.57m
Pair 4
File
4DNFIIJHUSLV
18.03 GB
151
  Pass
234.69m
File
4DNFI79DK4TF
19.2 GB
151
  Pass
234.69m
Pair 5
File
4DNFI63VZGPX
9.61 GB
151
  Pass
124.45m
File
4DNFICHZSF6I
10.25 GB
151
  Pass
124.45m
Pair 6
File
4DNFICWDOU8H
22.19 GB
151
  Pass
282.04m
File
4DNFIR5IZGU3
23.44 GB
151
  Pass
282.04m
Pair 7
File
4DNFIODO8RSU
10.48 GB
151
  Pass
132.42m
File
4DNFIEAQHCIB
11.09 GB
151
  Pass
132.42m
Pair 8
File
4DNFIKT899DZ
16.45 GB
151
  Pass
223.96m
File
4DNFI3ZFPSNH
17.62 GB
151
  Pass
223.96m
Pair 9
File
4DNFIB1APPPL
6.69 GB
151
  Pass
90.52m
File
4DNFI759VAYU
7.2 GB
151
  Pass
90.52m