ExperimentSetReplicate

ExperimentSet4DNES8NBUERX
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RNA FISH of Prdx2 and Pabpc1 intronic regions in G1E-ER4 cells

   September 14th, 2018 at 4:59pm
Source Publication
Transcriptional Burst Initiation and Polymerase Pause Release Are Key Control Points of Transcriptional Regulation.
Bartman CR, Hamagami N, et al., Molecular cell 2018

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
Experiment Type(s) 
RNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCm38:8:84969622-84974811 mouse region, GRCm38:15:36595658-36608973 mouse region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCm38:8:84969622-84974811 mouse region targeted by Cy5-labeled custom oligos
ch02
GRCm38:15:36595658-36608973 mouse region targeted by Cy3-labeled custom oligos

12 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEX2R4W1P6
Bio Rep 1, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFI3ITDL7C
csv
29.34 kB
File
4DNFIH13H7SI
coordinates (csv)
6 kB
File
4DNFI5WQP66B
csv
56.65 kB
File
4DNFIZVHXF5P
coordinates (csv)
15.78 kB
Experiment
4DNEXYRW2ZQW
Bio Rep 2, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIEI75QY6
csv
15.83 kB
File
4DNFIY9BUCNJ
coordinates (csv)
3.12 kB
File
4DNFI2BU9IYM
csv
42.08 kB
File
4DNFIRZUYT17
coordinates (csv)
12.69 kB
Experiment
4DNEX15R3U48
Bio Rep 3, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIMAH7GXA
csv
11.78 kB
File
4DNFIKCOW2S7
coordinates (csv)
2.57 kB
File
4DNFICB1R2AP
csv
30.61 kB
File
4DNFI9NG8NQ5
coordinates (csv)
9.21 kB