ExperimentSetReplicate

Browser Suggestion

Google Chrome  or Mozilla Firefox are the recommended browser(s) for using the 4DN Data Portal.

Microsoft Edge, Safari, Opera etc. should work for a majority of portal functions but are not explicitly supported and may present some glitches, e.g. during submission.

ExperimentSet4DNES46RZHBX
released
View JSON

single cell methyl Hi-C on control Crispr treated but unmodified WTC-11 iPSC cells differentiated for 20 days to cardiac myocytes.

   December 19th, 2024 at 7:55pm
Source Publication
Dose-dependent sensitivity of human 3D chromatin to a heart disease-linked transcription factor.
Grant ZL, Kuang S, et al., bioRxiv : the preprint server for biology 2025

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
in vitro differentiated cells
Sample 
WTC-11 differentiated to cardiac muscle cell
Experiment Type(s) 
single cell Methyl Hi-C
Modification Type 
None
Treatment Type 
None
Assay Details 
None

8 Raw Files

Biosample
Experiment
File
File Size
Sequence Length
Overall Quality
Total Sequences
Biosample
4DNBSFDRV2RI
Bio Replicate 1
Experiment
4DNEX26H18AS
Tech Replicate 1
Pair 1
File
4DNFIYBRRUBK
15.58 GB
151
  Pass
258.29m
File
4DNFI1CDQOD8
15.54 GB
151
  Pass
258.29m
Pair 2
File
4DNFI79RDWQZ
23.49 GB
151
  Pass
392.44m
File
4DNFI4IJNM4D
23.58 GB
151
  Pass
392.44m
Biosample
4DNBS5QU9P8I
Bio Replicate 2
Experiment
4DNEXFZK6I5U
Tech Replicate 1
Pair 1
File
4DNFIUEKJSHK
16.76 GB
151
  Pass
276.48m
File
4DNFI9PUEDM7
16.77 GB
151
  Pass
276.48m
Pair 2
File
4DNFIHZ5VKCZ
25.75 GB
151
  Pass
427.86m
File
4DNFIZCYDTMY
25.89 GB
151
  Pass
427.86m