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8 fewer sets in 4DN-only Data.
 

Properties

Modifications
18 Common Properties
 Project
External
 Lab
Giacomo Cavalli, UM
 Experiment Category
Sequencing
 Experiment Type
in situ Hi-C
 Organism
Mouse
 Sample Type
stem cells
 Sample Tier
Unclassified
 Sample Category
Mouse stem cell
 Sample
ES-E14TG2a
 Tissue Source
stem cell
 Publication
Bonev B et al. (2017) Multiscale 3D Genome Rewiring during Mouse Neural Development.
 Treatments
No value
 Assay Details
Enzyme: DpnII
 Center
External
 Status
Released
 Commendations
No value
 Warnings
Biosample Metadata Incomplete
 Validation Errors
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
in situ Hi-C
ES-E14TG2a
Hi-C on E14Tg2 cell line
strong zfp608 activation with dCas9-VP64-p65-Hsf1
Enzyme
DpnII
in situ Hi-C
ES-E14TG2a
Hi-C on E14Tg2 cell line
strong sox4 activation with dCas9-VP64-p65-Hsf1
Enzyme
DpnII
in situ Hi-C
ES-E14TG2a
Hi-C on E14Tg2 cell line
zfp608 activation with dCas9-VP64
Enzyme
DpnII
in situ Hi-C
ES-E14TG2a
Hi-C on E14Tg2 cell line
sox4 activation with dCas9-VP64
Enzyme
DpnII
in situ Hi-C
ES-E14TG2a
Hi-C on E14Tg2 cell line
control - zfp608 gRNA with empty dCas9
Enzyme
DpnII
in situ Hi-C
ES-E14TG2a
Hi-C on E14Tg2 cell line
control - sox4 gRNA with empty dCas9
Enzyme
DpnII
in situ Hi-C
ES-E14TG2a
Hi-C on E14Tg2 cell line
control - zfp608 gRNA without dCas9
Enzyme
DpnII
in situ Hi-C
ES-E14TG2a
Hi-C on E14Tg2 cell line
control - sox4 gRNA without dCas9
Enzyme
DpnII
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