ExperimentSet4DNESBBYGJFA
released
August 12th, 2019 at 2:59pm
Source Publication
Multiscale 3D Genome Rewiring during Mouse Neural Development.
Bonev B, Mendelson Cohen N, et al., Cell 2017
Assay Description
Note on Processed Files
Some annotated bam and pairs files generated in this Experiment Set may contain distinct reads that share the same identifier. This was caused by merging fastq files with integer identifiers (eg. @1, @2) during processing.
Experiment Set Properties
Set Type
Replicate
Organism
Sample Type
stem cells
Sample
Experiment Type(s)
Modification Type
Crispr
Treatment Type
None
Assay Details
Enzyme: DpnII
10 Processed Files
Quality Metrics
Experiment
For File
Filtered Reads
Cis reads (>20kb)
Short cis reads
Trans Reads
Report
Details
Experiment
For File
Failed Balancing
Details
Experiment
For File
Total Reads
Unmapped Reads
Multimapped Reads
Duplicate Reads
Walks
Minor Contigs
Details