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3 fewer sets in 4DN-only Data.
 

Properties

Treatments
18 Common Properties
 Project
External
 Lab
Benoit Bruneau, UCSF
 Experiment Category
Sequencing
 Experiment Type
Dilution Hi-C
 Organism
Mouse
 Sample Type
stem cells
 Sample Tier
Unclassified
 Sample Category
Mouse stem cell
 Sample
ES-E14TG2a with random integration of EGFP and AID-tagged CTCF, Tir1 insertion
 Tissue Source
stem cell
 Publication
Nora EP et al. (2017) Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartme
 Modifications
No value
 Assay Details
Enzyme: HindIII
 Center
External
 Status
Released
 Commendations
No value
 Warnings
Biosample Metadata Incomplete
 Validation Errors
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
Dilution Hi-C
ES-E14TG2a with random integration of EGFP and AID-tagged CTCF, Tir1 insertion
Hi-C on CTCF-AID tagged mESCs
CTCF-depletion by auxin treatment followed by 24h wash-off
Enzyme
HindIII
Dilution Hi-C
ES-E14TG2a with random integration of EGFP and AID-tagged CTCF, Tir1 insertion
Hi-C on CTCF-AID tagged mESCs
CTCF-depleted by auxin treatment
Enzyme
HindIII
Dilution Hi-C
ES-E14TG2a with random integration of EGFP and AID-tagged CTCF, Tir1 insertion
Hi-C on CTCF-AID tagged mESCs
WT - untreated
Enzyme
HindIII
- fin -