Data Browser
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Properties

Sample Type
Sample Tier
Sample Category
Sample
Organ/System
Tissue Source
Treatments
Assay Details
Warnings
10 Common Properties
 Project
4DN
 Lab
Siyuan Wang, YALE
 Experiment Category
Microscopy
 Experiment Type
multiplexed FISH
 Organism
Human
 Publication
Cheng Y et al. (2021) PMID:34749781
 Modifications
No value
 Center
OFHHD - Schatz
 Status
Released
 Commendations
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
multiplexed FISH
IMR-90
Chromatin tracing of chrX
IMR90 cells, untreated, open chromatin region
Target
28 consecutive 30-kb loci on chrX (open chromatin), XIST transcript
multiplexed FISH
IMR-90
Chromatin tracing of chrX
IMR90 cells, untreated, closed chromatin region
Target
28 consecutive 30-kb loci on chrX (closed chromatin), XIST transcript
multiplexed FISH
IMR-90
Chromatin tracing of chrX
IMR90 cells, DNA methylation inhibitor
Target
28 consecutive 30-kb loci on chrX, XIST transcript
multiplexed FISH
IMR-90
Chromatin tracing of chrX
IMR90 cells, EZH2 methyltransferase inhibitor
Target
28 consecutive 30-kb loci on chrX, XIST transcript
multiplexed FISH
IMR-90
Chromatin tracing of chrX
IMR90 cells, hyper histone methylation
Target
28 consecutive 30-kb loci on chrX, XIST transcript
multiplexed FISH
IMR-90
Chromatin tracing of chrX
IMR90 cells, transcription inhibitor
Target
28 consecutive 30-kb loci on chrX, XIST transcript
multiplexed FISH
IMR-90
Chromatin tracing of chrX
IMR90 cells, HDAC inhibitors
Target
28 consecutive 30-kb loci on chrX, XIST transcript
multiplexed FISH
IMR-90
Chromatin tracing of chrX
IMR90 cells, untreated
Target
28 consecutive 30-kb loci on chrX, XIST transcript
multiplexed FISH
RPE-hTERT (Tier 2)
Chromatin tracing of chrX
RPE-1 cells, untreated
Target
28 consecutive 30-kb loci on chrX, mH2A.1
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