Included Properties
Data Type
Dataset
Sample Type
Sample Category
Sample
Organ/System
Tissue Source
Modifications
Set Type
Warnings
12 Common Properties
Project
4DN
Lab
Alistair Boettiger, STANFORD
Experiment Category
Microscopy
Experiment Type
FISH
Organism
Human
Sample Tier
Unclassified
Publication
Chen LF et al. (2023) PMID:36996812
Treatments
No value
Assay Details
Target: 80 spaced regions at SOX9 locus
Center
Bintu
Status
Released
Commendations
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
multiplexed FISH
H9 differentiated to cranial neural crest
Chromatin tracing of Sox9 in CNCC
CNCCs with CTCF deletion at SOX9 promoter (steps #7-58)
Target
80 spaced regions at SOX9 locus
multiplexed FISH
H9 differentiated to cranial neural crest
Chromatin tracing of Sox9 in CNCC
CNCCs with CTCF deletion at E1.35 (steps #7-58)
Target
80 spaced regions at SOX9 locus
multiplexed FISH
H9 differentiated to cranial neural crest
Chromatin tracing of Sox9 in CNCC
CNCCs wt (steps #7-58)
Target
80 spaced regions at SOX9 locus
multiplexed FISH
H9 differentiated to cranial neural crest
Chromatin tracing of Sox9 in CNCC
CNCCs wt (steps #1-80)
Target
80 spaced regions at SOX9 locus
multiplexed FISH
H9
Chromatin tracing of Sox9 in CNCC
ESCs wt, undifferentiated (steps #1-80)
Target
80 spaced regions at SOX9 locus
- fin -