Included Properties
Data Type
Lab
Experiment Type
Dataset
Sample Category
Sample
Publication
Modifications
Treatments
Assay Details
Center
Set Type
10 Common Properties
Project
4DN
Experiment Category
Sequencing
Organism
Mouse
Sample Type
stem cells
Sample Tier
Tier 2
Organ/System
No value
Tissue Source
stem cell
Status
Released
Commendations
No value
Warnings
Biosample Metadata Incomplete
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
2-stage Repli-seq
F123-CASTx129 (Tier 2)
E/L repliseq on F123-CASTX129 ESCs in 2i (2018-07-26)
late
Fraction
late fraction of 2 fractions
2-stage Repli-seq
F123-CASTx129 (Tier 2)
E/L repliseq on F123-CASTX129 ESCs in 2i (2018-07-26)
early
Fraction
early fraction of 2 fractions
in situ Hi-C
F123-CASTx129 (Tier 2)
Hi-C on CTCF-AID tagged F123-CASTx129
CTCF depleted by auxin treatment (0.5 mM, 96.0h)
Enzyme
MboI
in situ Hi-C
F123-CASTx129 (Tier 2)
Hi-C on CTCF-AID tagged F123-CASTx129
CTCF depleted by auxin treatment (0.5 mM, 48.0h)
Enzyme
MboI
in situ Hi-C
F123-CASTx129 (Tier 2)
Hi-C on CTCF-AID tagged F123-CASTx129
CTCF depleted by auxin treatment (0.5 mM, 24.0h)
Enzyme
MboI
in situ Hi-C
F123-CASTx129 (Tier 2)
Hi-C on CTCF-AID tagged F123-CASTx129
WT
Enzyme
MboI
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