Workflow Generation of multiresolution Hi-C contact matrices from a set of contact lists 0.2.6

This is a subworkflow of the Hi-C data analysis pipeline. It takes pairs files for all replicates of a sample, merges them and then produces multi-resolution Hi-c matrices for visualization. The pipeline produces 4 output files. 1) Replicated merged pairs file 2) Contact matrices in .hic format 3) Multiresolution mcool file and 4) normalization vector of mcool files for visualization in juicebox.