StaticSection QC

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October 5th, 2021 at 1:59pm

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QC

The 4DN version of the iMARGI pipeline also contains an output QC report and summary statistics generated on output pairs files. See an example report here.

Source files (v1.1.1_dcic_4)

CWL: https://github.com/4dn-dcic/iMARGI-Docker/blob/v1.1.1_dcic_4/src/cwl/imargi_qc.cwl
Script: https://github.com/4dn-dcic/iMARGI-Docker/blob/v1.1.1_dcic_4/src/scripts/imargi_stats.sh