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released
May 4th, 2018 at 2:44am
Restriction Enzyme Sites
The genomic positions of restriction enzyme sites are listed in the following format that the Juicer program recognizes.
<chr_1> <position_1> <position_2> <position_3> ...
<chr_2> <position_1> <position_2> <position_3> ...
...
An example of a few fields in the first line looks as below:
chr1 3004105 3005820 3008316 3008894 3009813
The files can be obtained from the links below.
| species | HindIII | MboI | DpnII | NcoI | MspI | NcoI-MspI-BspHI mix | AluI | DdeI | DdeI-DpnII mix |
|---|---|---|---|---|---|---|---|---|---|
| human | txt | txt | txt | txt | txt | txt | txt | txt | txt |
| mouse | txt | txt | txt | ||||||
| chicken | txt | ||||||||
| fruit fly | txt | ||||||||
| zebrafish | txt |