Search for ExperimentSetReplicate

Included Properties

Data Type
  • ExperimentSetReplicate150
    • Project
    Lab
    Experiment Type
  • FISH
  • multiplexed FISH150
    • Dataset
    Organism
    Sample Type
    Sample Tier
    Sample Category
    Sample
    Organ/System
    Tissue Source
    Publication
    Modifications
    Treatments
    Assay Details
    Center
    file_type
  • localizations1
    • Warnings
    4 Common Properties
     Experiment Category
    Microscopy
     Set Type
    Replicate
     Status
    Released
     Commendations
    No value
    150 Results
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESMSZ4F9I
    multiplexed FISH
    multicellular organism
    Multiplexed FISH in C. elegans
    ChrV - right arm, Wild type
    Target
    3 TADs on ChrV (right-arm) (roundworm)
    Ahilya Sawh Lab
    4DNESO3ZY323
    multiplexed FISH
    multicellular organism
    Multiplexed FISH in C. elegans
    ChrV - left arm, Wild type
    Target
    6 TADs on ChrV (left-arm) (roundworm)
    Ahilya Sawh Lab
    4DNESCSUHS2E
    multiplexed FISH
    multicellular organism
    Multiplexed FISH in C. elegans
    ChrV - central region, Wild type
    Target
    3 TADs on ChrV (central region) (roundworm)
    Ahilya Sawh Lab
    4DNES6N36I1G
    multiplexed FISH
    multicellular organism
    Multiplexed FISH in C. elegans
    ChrV - Cec4 mutant
    Target
    22 TADs on ChrV (roundworm)
    Ahilya Sawh Lab
    4DNES4LQ2W7R
    multiplexed FISH
    multicellular organism
    Multiplexed FISH in C. elegans
    ChrV - Wild type
    Target
    22 TADs on ChrV (roundworm)
    Ahilya Sawh Lab
    4DNESZK1WOO7
    multiplexed FISH
    multicellular organism
    Multiplexed FISH in C. elegans
    ChrI - Cec4 mutant
    Target
    14 TADs on ChrI (roundworm)
    Ahilya Sawh Lab
    4DNESO52B8EA
    multiplexed FISH
    multicellular organism
    Multiplexed FISH in C. elegans
    ChrI - Wild type
    Target
    14 TADs on ChrI (roundworm)
    Ahilya Sawh Lab
    4DNESB7SZY5Q
    multiplexed FISH
    H1-hESC differentiated to neural progenitor cell
    Multiplexed FISH in neural crest cells on Chr22
    sgNon-Targeting Control (for shCHD7)
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNESHA7AS6L
    multiplexed FISH
    H1-hESC differentiated to neural progenitor cell
    Multiplexed FISH in neural crest cells on Chr22
    shCHD7 targeted knocked-down
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNESIUBFH6Q
    multiplexed FISH
    RPE-hTERT (Tier 2)
    Multiplexed FISH in RPE1 on Chr21
    sgNon-Targeting Control (for siCHD7)
    Target
    34 TADs in Chr21, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNES94LRC75
    multiplexed FISH
    RPE-hTERT (Tier 2)
    Multiplexed FISH in RPE1 on Chr21
    siCHD7 targeted knocked-down
    Target
    34 TADs in Chr21, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNES6W6XBUJ
    multiplexed FISH
    RPE-hTERT (Tier 2)
    Multiplexed FISH in RPE1 on Chr22
    sgNon-Targeting Control (for siCHD7)
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNESNGLW3S2
    multiplexed FISH
    RPE-hTERT (Tier 2)
    Multiplexed FISH in RPE1 on Chr22
    siCHD7 targeted knocked-down
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNES6SPZBS6
    multiplexed FISH
    A549
    Multiplexed FISH in A549-Cas9 on Chr22
    GFP over-expression, Control (for CHD7 OE)
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNES5UHPM9B
    multiplexed FISH
    A549
    Multiplexed FISH in A549-Cas9 on Chr22
    CHD7 over-expression
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNESDOIAUSY
    multiplexed FISH
    A549
    Multiplexed FISH in A549-Cas9 on Chr22
    sgNon-Targeting Control (for siCHD7)
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNES1S6LQKZ
    multiplexed FISH
    A549
    Multiplexed FISH in A549-Cas9 on Chr22
    siCHD7 targeted knocked-down
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNESNWDMERJ
    multiplexed FISH
    A549
    Multiplexed FISH in A549-Cas9 on Chr22
    sgNon-Targeting Control (for sgZNF114)
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNES6RGJOMK
    multiplexed FISH
    A549
    Multiplexed FISH in A549-Cas9 on Chr22
    sgZNF114 targeted knockdown
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNESYSJOREU
    multiplexed FISH
    A549
    Multiplexed FISH in A549-Cas9 on Chr22
    sgNon-Targeting Control (for sgPCBP1)
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNESTEL2MX4
    multiplexed FISH
    A549
    Multiplexed FISH in A549-Cas9 on Chr22
    sgPCBP1 targeted knockdown
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNES7J5VP92
    multiplexed FISH
    A549
    Multiplexed FISH in A549-Cas9 on Chr22
    137 genes knocked-down (using 404 sgRNAs and 8 sgNTC)
    Target
    27 TADs in Chr22, Chromosomes, Geminin
    Siyuan Wang, YALE
    4DNESJ15KEBD
    multiplexed FISH
    F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
    Multiplexed FISH in Sox2 tagged F123-CASTx129 with 4CBS insertions between Sox2 and SE
    Knock-out of Kat6b
    Target
    101 40-bp regions on Chr11 (mouse), 4470 40-bp on the 205kb stretch from Sox2 gene to SE and surrounding regions (mouse), Chromosomes
    Bing Ren, UCSD
    4DNESQD7KQVS
    multiplexed FISH
    F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
    Multiplexed FISH in Sox2 tagged F123-CASTx129 with 4CBS insertions between Sox2 and SE
    FKBP12(F36V) degron targeting Rad21 (control)
    Target
    101 40-bp regions on Chr11 (mouse), 4470 40-bp on the 205kb stretch from Sox2 gene to SE and surrounding regions (mouse), Chromosomes
    Bing Ren, UCSD
    4DNESTLJOO1C
    multiplexed FISH
    F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
    Multiplexed FISH in Sox2 tagged F123-CASTx129 with 4CBS insertions between Sox2 and SE
    FKBP12(F36V) degron targeting Rad21 treated with dtag
    Target
    101 40-bp regions on Chr11 (mouse), 4470 40-bp on the 205kb stretch from Sox2 gene to SE and surrounding regions (mouse), Chromosomes
    Bing Ren, UCSD