Search for ExperimentSetReplicate

Browser Suggestion

Google Chrome  or Mozilla Firefox are the recommended browser(s) for using the 4DN Data Portal.

Microsoft Edge, Safari, Opera etc. should work for a majority of portal functions but are not explicitly supported and may present some glitches, e.g. during submission.

Included Properties

Data Type
  • ExperimentSetReplicate12
    • Experiment Type
  • Proximity-seq
  • NAD-seq12
    • Dataset
    Organism
    Sample Type
    Sample Tier
    Sample Category
    Sample
    Organ/System
    Tissue Source
    Publication
    Assay Details
    Status
  • Released12
    • Commendations
    Warnings
    7 Common Properties
     Project
    4DN
     Lab
    Paul Kaufman, UMMS
     Experiment Category
    Sequencing
     Modifications
    No value
     Treatments
    No value
     Center
    NBC - Kaufman
     Set Type
    Replicate
    12 Results
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESXE9K9DB
    NAD-seq
    F121-9-CASTx129 (Tier 2)
    NAD-seq on Tier 2 cell line F121-9-CASTx129
    nucleolar-associated DNA
    Target
    Nucleolus
    Paul Kaufman, UMMS
    4DNESUJZ5FL2
    NAD-seq
    F121-9-CASTx129 (Tier 2)
    NAD-seq on Tier 2 cell line F121-9-CASTx129
    control (WGS)
    Target
    None (Control)
    Paul Kaufman, UMMS
    4DNES15QV1OO
    NAD-seq
    C57BL6-MEF
    NAD-seq on MEF cells (not crosslinked)
    nucleolar-associated DNA
    Target
    Nucleolus
    Paul Kaufman, UMMS
    4DNES8D85R8H
    NAD-seq
    C57BL6-MEF
    NAD-seq on MEF cells (not crosslinked)
    control (WGS)
    Target
    None (Control)
    Paul Kaufman, UMMS
    4DNESV4F9PFH
    NAD-seq
    H1-hESC (Tier 1)
    NAD-seq on H1 cells
    nucleolar-associated DNA
    Target
    Nucleolus
    Paul Kaufman, UMMS
    4DNESV9Q2PMB
    NAD-seq
    H1-hESC (Tier 1)
    NAD-seq on H1 cells
    control (WGS)
    Target
    None (Control)
    Paul Kaufman, UMMS
    4DNESVA79ZRN
    NAD-seq
    HFFc6 (Tier 1)
    NAD-seq on HFFc6 cells
    nucleolar-associated DNA
    Target
    Nucleolus
    Paul Kaufman, UMMS
    4DNESFN9RH2P
    NAD-seq
    HFFc6 (Tier 1)
    NAD-seq on HFFc6 cells
    control (WGS)
    Target
    None (Control)
    Paul Kaufman, UMMS
    4DNESR3K7VRN
    NAD-seq
    C57BL6-MEF-c5
    NAD-seq on MEF-c5 cells
    nucleolar-associated DNA
    Target
    Nucleolus
    Paul Kaufman, UMMS
    4DNES4U7AY3P
    NAD-seq
    C57BL6-MEF-c5
    NAD-seq on MEF-c5 cells
    control (WGS)
    Target
    None (Control)
    Paul Kaufman, UMMS
    4DNESNEBF9W4
    NAD-seq
    C57BL6-MEF-c5
    NAD-seq on MEF-c5 cells (not crosslinked)
    nucleolar-associated DNA
    Target
    Nucleolus
    Paul Kaufman, UMMS
    4DNES7SVJXAI
    NAD-seq
    C57BL6-MEF-c5
    NAD-seq on MEF-c5 cells (not crosslinked)
    control (WGS)
    Target
    None (Control)
    Paul Kaufman, UMMS
    - fin -