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Included Properties

20 Common Properties
 Project
4DN
 Lab
Bing Ren, UCSD
 Experiment Category
Sequencing
 Experiment Type
IP-based 3C
 Dataset
low coverage parameterization
 Organism
Human
 Sample Type
immortalized cells
 Sample Tier
Tier 1
 Sample
GM12878 (Tier 1)
 Organ/System
immune system
 Tissue Source
B-lymphocyte
 Publication
No value
 Modifications
No value
 Treatments
No value
 Assay Details
Target: H3K27ac
 Center
NOFIC - Ren
 Set Type
Replicate
 Status
Released
 Commendations
Gold Biosample
 Warnings
No value
1 Results
Title
Set Type
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
Replicate
PLAC-seq
GM12878 (Tier 1)
low coverage parameterization
0.5% SDS in H2O, 62ºC, 10' + long nuclei prep
Target
H3K27ac
- fin -