Search for Experiment Set

Browser Suggestion

Google Chrome  or Mozilla Firefox are the recommended browser(s) for using the 4DN Data Portal.

Microsoft Edge, Safari, Opera etc. should work for a majority of portal functions but are not explicitly supported and may present some glitches, e.g. during submission.

Included Properties

21 Common Properties
 Project
4DN
 Lab
Arjun Raj, UPENN
 Experiment Category
Microscopy
 Experiment Type
FISH
 Dataset
nascent transcript RNA FISH - JQ1 treatment
 Organism
Mouse
 Sample Type
stem cells
 Sample Tier
Unclassified
 Sample Category
Mouse stem cell
 Sample
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
 Organ/System
No value
 Tissue Source
stem cell
 Publication
Bartman CR et al. (2018) PMID:30554946
 Modifications
No value
 Treatments
Chemical
 Assay Details
Target: Chromosomes, GRCm38:10:79682195-79688398 mouse region, GRCm38:11:102348820-102365281 mouse region
 Center
NT - Raj
 Set Type
Replicate
 Status
Released
 Commendations
No value
 Warnings
Biosample Metadata Incomplete
1 Results
Title
Set Type
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
Replicate
RNA FISH
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
nascent transcript RNA FISH - JQ1 treatment
cdc34, slc4a1 probes, +JQ1
Target
Chromosomes, GRCm38:10:79682195-79688398 mouse region, GRCm38:11:102348820-102365281 mouse region
- fin -