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Included Properties

Data Type
  • Experiment Set1
  • ExperimentSetReplicate1
    • Sample Category
  • Mouse stem cell1
  • Tier 21
    • Modifications
  • Crispr1
  • Stable Transfection1
    • Accession
  • 4DNEX4J4Z9WE0
    • 19 Common Properties
     Project
    4DN
     Lab
    Bing Ren, UCSD
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Dataset
    Hi-C on CTCF-AID tagged F123-CASTx129
     Organism
    Mouse
     Sample Type
    stem cells
     Sample Tier
    Tier 2
     Sample
    F123-CASTx129 (Tier 2)
     Organ/System
    No value
     Tissue Source
    stem cell
     Publication
    Kubo N et al. (2021) PMID:33398174
     Treatments
    Chemical
     Assay Details
    Enzyme: MboI
     Center
    NOFIC - Ren
     Set Type
    Replicate
     Status
    Released
     Commendations
    No value
     Warnings
    Biosample Metadata Incomplete
    1 Results
    Title
    Set Type
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNES1QUXG92
    Replicate
    in situ Hi-C
    F123-CASTx129 (Tier 2)
    Hi-C on CTCF-AID tagged F123-CASTx129
    CTCF depleted by auxin treatment (0.5 mM, 96.0h)
    Enzyme
    MboI
    Bing Ren, UCSD
    - fin -